 |
Simple sequence repeat (SSR)
>UN40377
AAAACACACACACACAAATATTTTATAAAAAAGAAAACAAATATTTCCACAGAGTAAGAATAATCAGAGACTGCCCACCAGCTTTTTTTCGTTC
TTTCACACCTCTGTTTTGATTAAAGAAGAAATGATGATGGAAAGTAGAGATCCAGCTATTAAGCTCTTCGGTATGAAAATACCTTTTCCGGCTG
TTTTCGAACACCCGATGACGGTGGCGGTGGTTGAGGAAGAGCATACCGGCGGAGATGGAGGAGATGATAAACCACCAGAGAAGGTAACTACAGA
GCAAGTAACTCCAGAGTTATCAGAGAAGAAGAATAACTGTAACAACAACAACAACAATCTGAATGATTCAAAACCCGAGACAGGGGACAAAGAG
GAAGAAGCGACATCAACTGATCAGACAGAGAGCGATCAGCAGACAACAGAAGACGGTAAAACCCTGAAGAAACCAACCAAGATTCTGCCCTGTC
CCAGGTGCAAGAGCATGGACACCAAGTTCTGTTATTACAACAACTACAACATCAACCAGCCTCGCCATTTCTGCAAGGCCTGTCAGAGATACTG
GACCGCCGGCGGCACCATGAGGAATGTACCCGTCGGTGCTGGACGCCGCAAGCACAAAAGCTCCTCCTCTCATTACCGTCACATCACCATCTCC
GAGGCTCTCCATGCTGCAAGGCTCGATCCCGGCTTGCAATCCAACACACGTGTCCTGAGCTTTGGTTTACAACCTCATCAGCAGCACGCTGCTC
CCATGACCCCCGTGATGAAGCTACAAGGAGACCAGAAAGTCCAAAACGGAGCTAGAAACGGGTTAGCGGATCAGCGGGTCGAGAATGGAGATGA
CTGCTCAAGTGGATCCTCTGTGACTACCTCTGTGGATGAAACAAGAGCACAGAGCTGCAGAGTTGTTGAGCCACAAGTGAACAACAACAACAAC
AACAACAACAACATGAATGGTTATGCTTGCATCCCTGGTGTTCCATGGCCCTACACGTGGAATCCAGCGATGCCTCCACCAGGTTTCTACCCAC
CTCCAGGGTATCCAATGCCGTTTTACCCTTACTGGACCATCCCAATGCTACCACCGAATCAATCCTCATCACCAATAAGTCAAAAGGGTTCAAG
TCCAAACTCTCCCACTCTAGGGAAGCACTCGAGAGACGAGGAATCTTCAAGAAAGGGCGATGAAACAGAGAGGAAACAGAGGAACGGGCGGGTT
ATAGTCCCGAAAACGTTGAGAATAGACGATCCTGACGAAGCAGCAAAGAGCTCTATATGGACAACATTGGGAATCAAGAACGAAGGTTCGAGAT
TGGGAAGCAAAGGCGGTGGTATGTTCAAAGGGTTTGATCAGAAGACGAAGAAGAGTAACAACGAGAACCCTCCTCTTCTTTCTGCTAACCCTGC
TGCTCTATCGAGATCACTCAATTTCCAAGAACGGGTCTAGAGTTGATATACGTATGTATATATCATATATATGTATGATTGTTTGTATATACAT
TTTATTGGACAATGAAGGTTTG |
Primers for UN40377 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGTTGAGGAAGAGCATACCG |
59.694 |
20 |
ACAGGGCAGAATCTTGGTTG |
60.111 |
20 |
253 |
217 |
469 |
| 2 |
GGTTGAGGAAGAGCATACCG |
59.694 |
20 |
GCTTCTTCCTCTTTGTCCCC |
60.19 |
20 |
168 |
217 |
384 |
| 3 |
GTTTTCGAACACCCGATGAC |
60.362 |
20 |
GCTTCTTCCTCTTTGTCCCC |
60.19 |
20 |
197 |
188 |
384 |
|
|
