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Simple sequence repeat (SSR)
>UN40395
CTAAGAAATTCACACTACATGTATTTAAAAAGATTTTGAAGTTTATACAATTTAGCTGTAGAGTTTAGAGAATTCCTTCTAATGCAAAGCCCTA
ATCTCACTCAATTGTTTGCTTAATACATAAGCTTCACAAGTTCAGGAAATATCACACTCCAAATATTAAAACTACAGAATAACTCACAAACAAA
ACAAGAAAACAGAAAAAGAAACATCAACATTAGAACTGCAATGCAAAGATCAAGATCAAATGTTCTTGTTCTGTAAACAACAATATGTACGCAT
TGTAGATTTCTCCGTGTTTATTCGGACCGTACTCTATCCAATCTATCAACACTCTTCCTTCCTCTCTCAATCTCATGATTATTCTGATGATGAT
GATGATGACTATAGTGGTCAACGCTCTTCCTCGCCTTGTCATGGAGGTCAACGCTCCTCCTCGACCGGTCCAAATGCTGCTCGAAAGTGATTCT
CAGCTTACTCTTCTTGGACTGACCCTTGGGAGGTTTCTCTTTCTCCCTTCTGTCGACGCTCTGTCTTGGTTTCTCTCTTCTATCAACGCTCTGC
CTCGGCATCTCGACATCGCTGCTCTGGTTTTCCGATTGGTGGCACGTGCTCTTCCTAGAGGAGAGAGACCTCTCTACGGTTGTGATAAACTTCT
TTAGGTGTTTGATGTATTCAGGGTACTGTTCTAGATCACAGTGGTTACCACCTTCGAGCCAAAGCGGTTCGTACTTGTCTTTAGAGAGTTCCCA
TAACTGTTTCCCGTGGGAACAGTCAACAACTTCATCACTAGTTCCCTACAACAAATATGAATAAACATAGAGAAAGAGTTAAAGACAAGATCAA
GAACTCAAAAAAAAAAAAGAGAGACAGAGAAATGGATATATTATTGGAGTCC |
Primers for UN40395 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCTCCGTGTTTATTCGGACC |
59.933 |
20 |
CGTCGACAGAAGGGAGAAAG |
59.982 |
20 |
238 |
291 |
528 |
2 |
TCTCCGTGTTTATTCGGACC |
59.933 |
20 |
TCACTTTCGAGCAGCATTTG |
60.134 |
20 |
176 |
291 |
466 |
3 |
TCTCCGTGTTTATTCGGACC |
59.933 |
20 |
CCAAGGGTCAGTCCAAGAAG |
59.691 |
20 |
209 |
291 |
499 |
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