 |
Simple sequence repeat (SSR)
>UN40397
CGGGCCAACTCTAAATCTGATGATAGAAATACAAAAGAATCATGGAATGATTACAACTATAATTCAATCACATAAGAATAATGACGATCCTATA
AATAAAAAAGGGTATCACAATCGAAAAAACAAAAGACTTTGTTCTTAAACTGGGAATCTACCGGTCATCTGTATATGCTCAAGTGTTTTAGGCA
AACCATACTTGTTAACCGCTAACCTCCCGGCCCTGAACCCGTCTCCATAAACCGGAAAAGCATCAGACTCGATTTGGTGCTTGAAAAACTCACC
AAGCTTCCTCTCGTACTGCGATCTTGGTCCCTTCTTCACTCCTCTAGAAGAAGGAGAAGATGATGATGATGATGCAACATTGCTGTTTCTTGAA
CCAGCAGCTAACTCGGCTTCTAACCACTTGTGAGCCATCACTTGACATATTCCTTCTTCAACGTCTTGGCTCAGTGTCCGGAATCCTTTGAGGC
GCATCCACGCATGCATCATCTCATGAGCTAGGATCGAACCGGTGAGTAGCCTAGGGAGCCCAAATAAGATGAGAATGGCAGTGACCTCGCATTG
ACGCGTTAGCTTGTAAGGCTCTGTAATCATATTCCCAGCCCAGTTTCCTGTCCCATGCTTCGATCTCTTTCTTACAGTGCTAACAGTTTGTTCT
TCTGAAAGACAGAGTCCTCTCGTCTCTGGCATGTGATAGTGACCATTCTTTTCACCTTCTCTGGCTTAGTTAAGTGCTTGCCTCTCAACTAAAA
GAAGTGGAACGTCCTGCTCCACCTTCATGAAAAGCCCTTCGTAGAATTCTTGTATCTGCAAGTAGAGAGGTTGACATTGAAAAGTGTCCATGAC
CGCTGAGTCCAGACACTCGAGACAAAGTTTCCGTCCATCGTTAAGTTCAACATATCCTGTATTCCTTGGCTCCATTCTTTCACAACTGCAACAT
CTTGGGGTAGCATCGTGTTCGTGGGAAGGGCAATACTTCTGGACCCAAAAAGGATGCGCCCTATATTCAATAAGACCAGCATGGTTTGTTGGAA
TAAAGAGGCTGCAGACATCACACTTTGGATGATATCTCTCTCTGTAACAAGCTTTGTGAAAAGGGTAGTTCCCAGATGTAGAAAACTCGTACTC
AGAAATGGGGTGCCTACAGCCATAACATCGAAAACATTCTGGATGCCATAGTGCATTCAAGCAATTAAGATATCTTCCATGTCCAATCTCCATA
TTGCACCCAGCACAAATCCTGAAATCCATAGGAAAAGCAGTAGGTCTTGGATAATAAATATCTCCATTGGCAAATACATTTCCTCCTCCACCTC
CACCTCCATGCATATGTCCATTCCCGTATACGTCTCCACCAGCCCCACCATACGCACTCCCAACATCATAACTGCTTCCATGCTTCTGACGCGG
TGTATTATTCCCAACTACCATACTTTCTTGTATGGCTCTAGCGAGTTGCTCATCTTCATCCACCATTGCGTATTTCCCTGTATTATTATTGGTC
TGTCCTTGACTCTCTTCTAGTAGTGACAATGCGATTGCACGGTCTATTTCTTCATTCTCCTGCTCGTTAGATGTATCCTCCTCGGAGGTAGGTG
GTTCCTGAGTATGATGATGAGTATCATCAGGATCAGGATCAGGATCTGTATCAGCAGCACTAGGCTCATCATTATCATGTGGATAACTCTGATA
ATAGCCGCCGCCATTGTGATCGTGGTCATTATTCCCAACCCGGAACCTTTGGGTAGAGCCTTTGAAGATCTTGTTAAACCAACCCATAGTAGTA
ACCCTCTTCTTCCTAGTAGTACTAACTAACTATCTGCTCATATAGTCAATGTAAAGCTTAAACTTCTTTCACCTTTGAGAAAAATTAAGGCGAA
ACCCCTTGGATCAGAGAGAAGATCTCCC |
Primers for UN40397 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CTCCATAAACCGGAAAAGCA |
60.067 |
20 |
CACTGAGCCAAGACGTTGAA |
60.025 |
20 |
222 |
231 |
452 |
| 2 |
CGTCTCCATAAACCGGAAAA |
59.931 |
20 |
CACTGAGCCAAGACGTTGAA |
60.025 |
20 |
225 |
228 |
452 |
| 3 |
CCTGAACCCGTCTCCATAAA |
59.926 |
20 |
CACTGAGCCAAGACGTTGAA |
60.025 |
20 |
233 |
220 |
452 |
|
|
