 |
Simple sequence repeat (SSR)
>UN40403
AATAATAAGATTGAGTAGATAAATAGAGAACACCAACCAAAGAGCAATAGCAATAGTAGAAATTAAACAAAATCTTGATCATCCTACAGAGTTC
TGGAAGTAATCCAAGAAGAAGAAGAAGGCTCATGACAAAAGAAAATCAAATTTCTTATGATACCTTAAAAGATAAAACAAAAATCTTAGAAAAC
ACGGGTGGGTGGACTCATTGTGCTCTTCAAGTACAAGCACCTCACATTTTGCCAGTTTTTCTTCAAGGGGGAAACAAAGAAGTTGACGCTCATC
TGAACATTCTGGAAGATCTGCTTCTCCTCCATGCCGAGATTTCCAACAGCGACACCCATGCAAAGAACCTTCTTAGGATAGAACTTCACTGTTG
CCTTGGTCTCATTCACTTTGGATTCCAAAGACCCTTGGTGGCTAACAAGAGTTGGGAACTTTCCTGCCTTGTTGAGACCAGGACCAAGAAGACG
GGGAATCTGTTTAATAACAGATTCAGAAGCAAGGAAAGCATGGAACTTCTTAGCTAGCTTCTTAACAAGCTTCTTGTTCTTGTTCAGCTTCTTA
AGTGCTTCCACATCCATAGACTCCAACCCAATCTTCTCAGCCTCTTCAACGTGCTGGGCGTCGCCGAGCATGCAAATCTTCATCTTAGGCCTAG
GAATGTGGGGCAACTTAACGGAACCGCTAAACCTCTTGTCCTTTTGAGGGTCATAGTTCTTAAGACCAATCTGGAGCTCGATTGTCTCGGTGAA
CTTGCGAGGCTTCGTCTCCTTGCAGTGAGTGATGATGGACGATATCGCCTCTCTCACGGCTTCACTCTGGAGCTTACTCATTTTGGCACTTCCT
GAGAGCTACTATTCTCTCCTTTGTGATAGATCGGAGACAGAGAGAGAGCC |
Primers for UN40403 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCAACCAAAGAGCAATAGCA |
58.917 |
20 |
AGAGCACAATGAGTCCACCC |
60.12 |
20 |
182 |
33 |
214 |
| 2 |
CCAACCAAAGAGCAATAGCA |
58.917 |
20 |
CCCTTGAAGAAAAACTGGCA |
60.22 |
20 |
225 |
33 |
257 |
| 3 |
AGAACACCAACCAAAGAGCAA |
59.766 |
21 |
AGAGCACAATGAGTCCACCC |
60.12 |
20 |
188 |
27 |
214 |
|
|
