 |
Simple sequence repeat (SSR)
>UN40404
GGAGTGTAAAATTGAAACGAATCAAAAATCGTTTCTAGAGAGAGAGAGACGAAACGATGTCGTATCTTCTACCGCACTTGCATTCCGGCTGGGC
TGTTGATCAAGCGATTCTAGCTGAGGAAGAGCGTCTCGTGGTCATACGTTTCGGCCATGATTGGGATGAAACCTGTATGCAGATGGATGAGGTG
CTGGCGTCAGTTGCTGAGACGATAAAGAACTTTGCGGTTATATATCTGGTGGACATAACTGAGGTTCCAGACTTCAACACCATGTACGAGCTCT
ACGATCCTTCGACGGTTATGTTCTTCTTTAGGAACAAACACATTATGATCGATCTTGGAACTGGTAACAACAACAAGATCAACTGGGCTATGAA
GGACAAGCAAGAGTTTATCGATATCATCGAGACCGTCTTCCGTGGTGCAAGGAAAGGTCGTGGGCTCGTGATTGCTCCAAAAGATTACTCCACC
AAATACCGCTACTAATCGGTCTTTCCAACACGTTGCCCGTTGGAGTATGTTAAAAAAAACATTGGATCAAAACTCTTTCCATGTTAGAGTTGTT
CTGGTCAAGGTGAAATATCCTATGAACTTGTTGCAGGTATGCTTTGATATGATTTGTGATGCTTACTCTTTTCGGCTGTTTGGCCATTTATAAT
GTATGCAGTTGCTTCAAACATGAATAGCCGAAATGAATGTGTTTATGTTTAACGTGTATAGTATAAGGTTCTTGATCTTCCTAC |
Primers for UN40404 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAATTGAAACGAATCAAAAATCG |
59.408 |
23 |
TGCATACAGGTTTCATCCCA |
59.924 |
20 |
167 |
9 |
175 |
| 2 |
AAATTGAAACGAATCAAAAATCG |
59.408 |
23 |
CGAAACGTATGACCACGAGA |
59.716 |
20 |
139 |
9 |
147 |
| 3 |
AATTGAAACGAATCAAAAATCG |
58.176 |
22 |
TGCATACAGGTTTCATCCCA |
59.924 |
20 |
166 |
10 |
175 |
|
|
