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Simple sequence repeat (SSR)
>UN40408
GCTTATATTTGGAGTTCTTCTGCTTTCTTATCAAACTAATTAACACGAGAGACCATTCAGAGGTTAAATATTTAGATTCAGTATCGTGTTCTAC
ACGGATTGATTCTTCTTTTGTATTCCAATGGATTACGCAAGAACCGAGTCGTTGCAAGCTAGTCTAGATTCAGAGCAAGAAGGATCAACGATAT
CTGAATCTGGAAGCTGTGATGCTTATGATCATCAACCAAGACCGTCTTTCGCCGAGGAATACGGGCTTGTGGAGCTGCTCGAAGGCGACAAGGC
TTACGATCTAATCTACCGAAACTGTAAGTCTGGGCTTGGTGGAGACCAATGCCAGCTCCTCTCCATCCTCAGAAACGGGTTTGGAACCCTCGGG
GCTCGTGCAAAGCTCAAGTCCTTCCAGGTTTTTCAAGAGGCGGTGGAGATGAAACACGTCGGTGAAGAAGGCGGCGGCGTGGGGAGCAGAGTCA
AATACGGTTGGTGCGCCGTCACGAAAACAGAGTTGAAGTCTGTTTTGGAATACGGGTTTAGCCAGCCGAGTAACGACGGATCTTATGGTCGTGG
CTTGTATCTGTCCCCGGATAATGCGCTTCGTGAATGTGTGAAGGATTCAGCTGCGGACTCAGAAGAAGATGGGATGAGATTCTTACTGCTTTCG
AGAGTTATACTTGGAAAGTCGGAGGTTGTTCCACGAGGCTCGACTCAGTCGTGTCCTAGCTCACCAGAGTTTGATTCTGGTGTAGATGATTTAG
CTTCTCCGAAGAAGTATATCGTGTGGAGCACACACATGAACACACACGTCTTGCCTGAGTTTCTTGTCTGCATCAAAACTCCGTTTAACTTCAA
CCGTAAGCAAAACCAAAACCAAAACCAAAACCAAAACCAATCGCCAAGAAGATTGAGATCGCCATGGATGCCATTTCCTGTACTGATCAAAGCA
TTATCGAAGTTCCTACCTCCTTCTCAGATATTCATCATTCAAAAACACTATAGAGATCAGCAAGACATGAGAATCTCGCGGAGCGAACTAATAC
AACGAGTAAGAAGAGTAACAGGAGACAAACTGCTTGTTCATATCATCAAAACTTTAGGACATAAAGTACAACAACGTTGAAAACTCCATTGCCG
AGAGAGATATCACACAGCATCACAAAGGATCAAGACCGGCTCAGAGATTTGTATGTGTAAAAAACATAGAGGAGTCTGCTGCTGTTTGTCTTTT
TCCATGATAGTGACGAAATTTTATTCTTT |
Primers for UN40408 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CACACACGTCTTGCCTGAGT |
59.94 |
20 |
GCGATCTCAATCTTCTTGGC |
59.923 |
20 |
116 |
793 |
908 |
2 |
ACACACACGTCTTGCCTGAG |
59.94 |
20 |
GCGATCTCAATCTTCTTGGC |
59.923 |
20 |
117 |
792 |
908 |
3 |
TGGAAAGTCGGAGGTTGTTC |
60.088 |
20 |
GCGATCTCAATCTTCTTGGC |
59.923 |
20 |
239 |
670 |
908 |
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