 |
Simple sequence repeat (SSR)
>UN40440
GGGCGGTCAACTTAAAAAGACCAACAAAAAACAATTTGGGATCGAAAGGGGGAAATTAGGGTTTGACAATCGAGATGGATACAAAATCAAGCGA
CGGCGAGAAAAAGGAGGAATCCTCGATCGAGACGGAGCCAATGGAAACTTCCACCGGCGTTGACACTTCCTTGCTAGGGAAGCTCAAGTTGGAG
GAAACACAAGACCAGGAGAGTTCCGGTGAAGAGGAAGTCGACGGAGATGAGGAGGAAGATGAAGTGGAGGAGGAGGAGGAGGAAGGTAGTGATT
TCTATTGGGAGAAGGACAGTTTCGATGGGCGGGAATATCATTCCTCTGACGACAGTGAGTACTCAGACGAGGATCTAGGGGAAAAAGCACGTTA
TTACTATCGCACGGTTATCGAAACCAAGGGTTTCTTTGAGTCATCGAATAAGCTCCCCATGTACCTTTGGTCTGGAATTGGTGTGGTCTCGAAG
CGGGATCTTGACACCAGTCGTGAGTTCATCGGGAACATGGTGTCTGAATGTGTTGAAAAACACAACCGAAGAAACAATAAGAATGTGAGGTTCG
AGCATTTATTGAGGGCTAATTTCGACCCAGGAGCCAAGACTAAGTACTACATCACCTTTGCTGCAAAAGAATCCGACTCTCCTGATGCGCCTCT
CGTGGAGTATCAAGCTAAGGTGGTTTGGTCTGCTGGCGTTACTTACCCCATCTTTTGCAGACCCGCTCCACCACCTAAACAGGGGTAGGGTAAT
GTATATAGCTTTCAGTTATCACTCTTTCTTGGACTAGAAGAGATATTAAACATATCATAATAATTAAAAACCTGCTATGTATTTTCTCTTATTT
GTGATACAAATATAATTTCTACACTTGATGCAAATGTGGGTTCCGTGGATCACAATGTCTTTTGTGATGATCCATTTCAACTGTATTTATTACC
TGTGGAGCCTTGTCTTCAAACAATGTGGAGTCCCAAGTTCGATGGTAAAT |
Primers for UN40440 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCCTTGCTAGGGAAGCTCAA |
60.088 |
20 |
TGGGGAGCTTATTCGATGAC |
60.036 |
20 |
274 |
162 |
435 |
| 2 |
TTCCTTGCTAGGGAAGCTCA |
60.088 |
20 |
TGGGGAGCTTATTCGATGAC |
60.036 |
20 |
275 |
161 |
435 |
| 3 |
CGGAGATGAGGAGGAAGATG |
59.755 |
20 |
ACGACTGGTGTCAAGATCCC |
59.969 |
20 |
262 |
230 |
491 |
|
|
