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Simple sequence repeat (SSR)
>UN40449
ATTAAATTAATTACTATTTATAAATTTAAATTGGTTTACATATAAATCTCGGTTTACAAACTGACCAAAATTAAAAAAGAAACCGAGTAAATCA
AATAAACTTACACTAAACCACACAAACCTAAAATAAACCAAAAACCTAAACCTAATCCATAGTCAAACATCTCTTCAGCCTCTTAGCCGTCAAT
TTCAGCCTCTTCGCCATCCTCCTTCGCGGCGAGTTTCCGGTGGAGATGCTGGTGGATTTGTCTTCTTCCTCCTCAAAGCCATCAATTTATTCTT
CTTCTACATCTTCCTCGGACAAATGGACCACCACCGAACATCATCTTCTCTGCCTCATTTACCTTCGTTTACCAGAAAAAAAACAAAAACAAAA
TCATAAGTAATGAAAACAGAGAGAGAGAGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTGAGATAG
AAGAGACTCGGGCGCTCTTCTTCTCCGGTGAGCCTCGGTGCCGCGTCCCAGCGAGTCTCAGTCTTTGTCGTTTCCATTATCATCTTCATCCTTA
CCAGATCTGAAAAGTAAGACATGAGAGAGTTGGTGAGTTCC |
Primers for UN40449 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCTTCCTCGGACAAATGGAC |
60.05 |
20 |
AAGACTGAGACTCGCTGGGA |
60.135 |
20 |
245 |
291 |
535 |
| 2 |
TCTTCCTCGGACAAATGGAC |
60.05 |
20 |
AAAGACTGAGACTCGCTGGG |
59.598 |
20 |
246 |
291 |
536 |
| 3 |
TCTTCCTCGGACAAATGGAC |
60.05 |
20 |
AGACTGAGACTCGCTGGGAC |
59.585 |
20 |
244 |
291 |
534 |
|
|
