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Simple sequence repeat (SSR)
>UN40530
TTTTTCTGTGACTTCTCTCTTTCAACCGTTTCCTTTTTCCTTCTCTCTCTCTCTGATCATGGCTTCCTCTGCATCACCTGGAGTGAAATTTGTG
CCAGAAGAGGATAACTTCTTGCAGAGACATGTGTCCTTCTTTGACCGGAACAAAGATGGCATCGTTTATCCTTCGGAGACATATCAAGGATTTA
GAGCAATCGGATGTGGATATCTCTTGTCGGCATTTGCTTCTCTGTTCATCAACATGGGTCTAAGCAGCAAAACTCGCCCGGGTAAAGGTTTCTC
CTTCTCATTTCCCATAGAGGTTAAGAATATACACCTTGCCAAACATGGTAGCGATTCAGGCGTTTACGATAAGGATGGAAGGTTTGTGGCATCG
AAGTTCGAGGAGATATTCGCGAAGCATTCAAAAACACATCCCGATGCTTTGACGGGGGAGGAACTCAAACAACTCCTTAACGCAAACAAAGAGC
CTAATGATCGCAAAGGAGCGATTGCTGGATATACAGAGTGGAAGATGTTGCATTATTTGTGTAAAGACAAGAACGGTCTGTTGCACAAAGAGAC
GGTGAGAGCTGCGTACGATGGTTCTCTTTTCGAACAACTCGAGAAACAAACAGTTTCTAAGAAGCATCCATAAACACCCGCTTCAACAAACACT
TATTTGCTTTTGAATCTGTTTATTATTCAAACTTTCAGTACATTATGTTATCGTGGACATGGCGTGAAGATTGCAATGCGTTTAGTTTTCTTTA
TTGATTATTGTGTATGTACTTGTACATTTGGGGCATTAT |
Primers for UN40530 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCTTTCAACCGTTTCCTTTTTC |
59.625 |
22 |
TGCTGCTTAGACCCATGTTG |
59.864 |
20 |
240 |
18 |
257 |
| 2 |
TCTTTCAACCGTTTCCTTTTTC |
59.625 |
22 |
AGCAAATGCCGACAAGAGAT |
59.843 |
20 |
209 |
18 |
226 |
| 3 |
TTCTCTCTTTCAACCGTTTCC |
58.423 |
21 |
CCGGTCAAAGAAGGACACAT |
59.966 |
20 |
130 |
13 |
142 |
|
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