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Simple sequence repeat (SSR)
>UN40552
CGATATAAGACAACAAATGTAGCTGATTTTTTAATCAAAAAAGTTCTCAGACATAAACAGATCCACTTGACTGAATAAGAATATAATATCTGAA
GTGTTACAAGACAGGCATATAGATAAAAATGGACAAAACACTCAAAGAACCCACCCCAATAGAGACTAGAGAGTCCTCAAGAAGAAGAAGGAGT
CTTGGTGTAAGAACGGATACCGAGAGCCAAGCCTAAGATGAGAAGAGGAACAAGGAACTGAAGGATCTTAACGAGAAAATCCGAGCTCTGGTTC
TGGTTAGACTCGGTCTGCTTAGGAGGAGGAGGAGGAACGAACTTGGTTTTGGCTGGGACAGTGGCTGTGTCAATATCACCAACATAGTACTCAT
CAAGCATAGCTTTAGCAGTCGAACTGTGTCCCACATCCTCAAAATCATCCGTCGCGTCTTTCCCTGTAGAAGTCAAGATGACCTCGTCACCACC
TGGATGGTCGTCCAAGAACTTTGTCACATCATAAACCTTGCCATCGATGACGATCCAGCAATCCTTGGCGGTAGTGTGCTGAGAAACCTCCGCC
AAGGTGTAAACTTTGCCGTCTCCGCCCATTTCTCCTCCGATGCAAACCC |
Primers for UN40552 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CGAGAGCCAAGCCTAAGATG |
60.11 |
20 |
CGACGGATGATTTTGAGGAT |
59.894 |
20 |
222 |
209 |
430 |
2 |
CCGAGCTCTGGTTCTGGTTA |
60.388 |
20 |
GGTGGTGACGAGGTCATCTT |
59.969 |
20 |
202 |
269 |
470 |
3 |
TACCGAGAGCCAAGCCTAAG |
59.609 |
20 |
GGTGGTGACGAGGTCATCTT |
59.969 |
20 |
265 |
206 |
470 |
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