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Simple sequence repeat (SSR)
>UN40631
GGGTAGTATTTCTTGACTTTGTAAGCTAACAAACAACAATCATGGCTAAACTTTTTCAGCTTATTCTTCCTCTCTTCTCAGCGATTCTTCTTCT
TGCCTTCACTGCTGCAGAATCCAACTCTTACTCCAAAACGACTCCGTTTCAAGGATACAAGCCAGAGAAACTCACGCACCTCCGCTTCTACTTC
CATGACGTCATATCCGGTGACAAACCCACCGCCATAAGAGTCACAGTGCCCCCCGTCGTAAACTCCTCCGCTGTCTCATCATTTGGTGTGGTTG
TGATAGCCGACATCCCTTTGACTGAGGGACCCGACCGGAGCTCCAAGGAAATCGGGAGGGCTCAGGGGATGTATGCGTCGACGGATATGAACAC
CTTAAGCTTCACCATGGTGTTTAACTTGGTGTTCACGGAAGGTGAGTTTAACGGCAGCACCGTCTCTATGTATGGACGGAATGCTATATTCTCA
AAGGTGAGAGAGTTTCCGATAATAGGAGGTACCGGTGCGTTCAGGCTCGCTAGAGGCTATGCACAGGCCGACACTTACTCGATTAGTGGTTTGG
ATGCCGTGGTCGAGTATAATGTCTTCGTTTCGCACTAAATGACGATGAAAGACAAATATCGAACTTGGCACGTGATGACTAGAGTGAACGAACG
TAACCAATAACGCTGAATCATTCAAACATTTGGCAGTATAAATTGTAATTACACTTCTTTTGTTGATGTTCTTATATTTTGATTTTGCTTTTCT
TTAAAACCTGATGTTGTTGTTGTTGTGTCGACTAAAGTTTAATAAAAGGTGTGTGAGTATATTTTATTGG |
Primers for UN40631 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
| 1 |
TCGTTTCGCACTAAATGACG |
59.872 |
20 |
CCAATAAAATATACTCACACACCTTTT |
58.147 |
27 |
234 |
589 |
822 |
| 2 |
GATTAGTGGTTTGGATGCCG |
60.331 |
20 |
CCAATAAAATATACTCACACACCTTTT |
58.147 |
27 |
272 |
551 |
822 |
| 3 |
CGATTAGTGGTTTGGATGCC |
60.331 |
20 |
CCAATAAAATATACTCACACACCTTTT |
58.147 |
27 |
273 |
550 |
822 |
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