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Simple sequence repeat (SSR)
>UN40684
TTTTTGTTTTTTGCTCTGTAAAGAATTAAAAGTTTCTTCCTTTCTTAATTTATATGAATCATTGATTCTCAAAGTTTTCTCCTTTTACCGTTTA
TTCTTAAGGAAGTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGTTGTATATAAACAAGAAGCATCTCTTGATTACTAGACACTGAAAGAAG
TCAAAAATTATTTTTGTTTGTTTGTTTGTGAAGTAGTAGGGTTTTGGTCTGATTTGATTTGATCTCTCCTGAGTTTTTGTCGGTTGGGTTCTTT
GTTTTATTTCTACAGTATTAGATCGACAAAAGAAAAAACAAAAAACAAAAAGGAGAGTTGTGGAGTGAGATCACTGCAGAAAAAAAAATGGGAT
CTTCTTCAGGACAAAGTGGATATGATCTGTCTTTCAAGATCTTGTTGATTGGAGATTCTGGTGTTGGTAAAAGCAGCTTGCTTCTCAGTTTCAT
TTCCAGCTCTGTCCAAGCTCTTGCTCCCACCATAGGTGTTGATTTTAAGATCAAACAGCTGAGAGTAAGAGGAAAAAGAGTAAAGCTTACAATC
TGGGACACAGCTGGACAAGAAAAGTTCAGGACATTGACAAGTTCTTATTTCAGAGGCTCCCAAGGGATCATTCTCGTTTATGATGTGGCGAAAA
GAGAGACGTTTCTGAACTTGGCAGATGTTTGGGCCAAAGAGATTGAGCTCTACTCGACTAACCATGACTGCATTAAGATGCTCGTTGGCAACAA
AGTCGACAGAGAATCTGAGAGGAAGGTAAGCCGGGAAGAAGGAACGGCTCTAGCGAAAGAACTCAAGTTTTTGTTTCATGAATGTAGCGCAAGA
ACCAGAGAAAACGTGAAGCAATGCTTTGAAGAGCTTGCTCTCAAGATAATGGATGTACCTAGTCTTTTGCAAGAAGGATCAAGCTCTCTGAAGA
GAAAACCGGATTGTCGAAATCATCAAAGCCGTTGCTGCTCGTGAGCTGTTTGATCATTGAAACCCGCCTAGGCTCTTTTTTATGTGTAAATTTA
TATCAAGAAGATGAAGCTTGGCTTCTCTGTAAATCTATCAGTTCAGTTCCTTAGATTGTTCATTTTGCCTCGTCTGAGATTGTGTAATAAAGTT
AATAACCTCATTATACAGAATGTCTTAAAAATATCTTATTTCC |
Primers for UN40684 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCTCAAAGTTTTCTCCTTTTACCG |
60.151 |
24 |
AACAAAGAACCCAACCGACA |
60.388 |
20 |
219 |
67 |
285 |
| 2 |
TCTCAAAGTTTTCTCCTTTTACCG |
60.151 |
24 |
ACAAAGAACCCAACCGACAA |
60.388 |
20 |
218 |
67 |
284 |
| 3 |
TCTCAAAGTTTTCTCCTTTTACCG |
60.151 |
24 |
ACCCAACCGACAAAAACTCA |
60.388 |
20 |
211 |
67 |
277 |
|
|
