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Simple sequence repeat (SSR)
>UN03649
GGCTGGACAGCATCAACAAACCACAAAGAGAGAGAGAGAGAGAAAAAAAATATTTCGAAAGAGAACCTCAAAGAAGCTAATTATTTACAGTTTC
GTCGCTAAGTTTACATATCTAAGCATTTCAACACCGCCATGTGTGGAGGAGCAATAATCTCCGATTTCATCCCACCGCCGAGGTCCCGCCGCGT
CACGAGCGAGTTCATCTGGCCGGATCTGAAAAACAAAGGGAAAGCTTCGAAGAAGAAGCGATCCGATTTCCTCGATCTGGAGGATGAGTTCGAG
GCTGACTTTCAAGGGTTTAAGGATGATTCATCTTTCGACTGCGAAGAAGAAGATGAATTCGACGTCGATGATGATGATGTCTTCGCCGATGTTA
AGCCCTTTGTTTTCACCGCAGGTACCAAGCCAGCAGCTTCCCCTCCCACCACTGGTCCAGTTTCTGGCGTAGAGTCTGGTGGGCAAGCTGAGAA
ATCTGCTAAGAGAAAGAGGAAGAATCAGTACCGAGGGATAAGGCAGCGCCCTTGGGGCGAATGGGCCGCTGAGATCCGTGATCCTAGAAAAGGC
GCTAGAGAATGGCTTGGAACATTCGACACCGCCGAGGAAGCAGCTAGAGCTTATGATGCAGCTGCACGCAGATCCGTGGTAATAAAGCTAAGTG
AATTTCCCTGAGGAGTTGGTCCCTAGCAAACGCCCTGCTGCCAGACAGCAATCTTAAGAAGCAGTGGCTACACTTTGGTCAGCAGCCACACATG
TGATCAGTACTGCACACTCCTTTAGTGACGTGAGTTCAC |
Primers for UN03649 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GCTGGACAGCATCAACAAAC |
59.297 |
20 |
AGGAAATCGGATCGCTTCTT |
60.173 |
20 |
259 |
2 |
260 |
2 |
CTGGACAGCATCAACAAACC |
59.139 |
20 |
CGGAGATTATTGCTCCTCCA |
60.17 |
20 |
155 |
3 |
157 |
3 |
CTGGACAGCATCAACAAACC |
59.139 |
20 |
AGGAAATCGGATCGCTTCTT |
60.173 |
20 |
258 |
3 |
260 |
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