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Simple sequence repeat (SSR)
>UN40780
GGACTTTTGTTTAGCTGAGAGCTCTATTTGTCTTCACTCTGAGAGAATCGAGAGAGAGAGAAGAAAATGGAGAAGGTTTTAACGAAAGTGACGA
GCTTTAAAGTGGGAGGATCATGGGTTTCGAAGAAAGCCAAGGAAGAGCTCTCCAACATCACCGATGACCTCACCACTTTCTCTAGTACCGTTGA
AGAGAAAGCCAAATGGGTTTTCAACAAGCTTAAAGGAAAGCCACTCAAAAGCTTACCAGAACTACTCAAAGAATACAACTTACCACCAGGACTC
TTCCCACAAAACATAATCTGCTACGAATTCGACGAGACCAAGAACAAACTCACTGTCTTCTTTGCTACACCCTGCGAAGTCACATTCAAAGATG
GATCAGCGATAAGATACGCTACACGCGTTAAAGGGATCTTGCTTAGAGGGAAACTGATGGGCGTGGAAGGGATGAAGACGAAAGTGTTGGTTTG
GGTTAAAGTCACGACGGTCTCAGTCGAGAGCTCGAAGTCCGACAAGCTCTGGTTCACTGCAGGTGTCAAGAAATCTCGGTCTAAGAATGTTTAC
GACACACCTCATGACGCTATCAAAGTCGTTGGAGAGTTCTAAAATATGTTGTTTTCAACGGTTCATTACCCATAAAATTCATAATTGGTTATTT
GGTTTTATTTGCGTATTGGGAAGAGGTATATATAACTCTCATCTTGGTGAAATGCGTTTCTTGTTGGCCACCCTAAATCTCTCATGTGTTTTTG
CTTTACACTTATTTAGTGACTTATAACGTCGTACC |
Primers for UN40780 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
| 1 |
GGACTTTTGTTTAGCTGAGAGC |
57.46 |
22 |
GGAGAGCTCTTCCTTGGCTT |
60.096 |
20 |
147 |
1 |
147 |
| 2 |
GGACTTTTGTTTAGCTGAGAGC |
57.46 |
22 |
TTCTTCGAAACCCATGATCC |
59.871 |
20 |
128 |
1 |
128 |
| 3 |
GGACTTTTGTTTAGCTGAGAGC |
57.46 |
22 |
TTGGCTTTCTCTTCAACGGT |
59.853 |
20 |
200 |
1 |
200 |
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