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Simple sequence repeat (SSR)
>UN40804
ACGTTGAAAAACCATTTACTTATATATAAAAAGAGAGAATCTCTCCTTGGAACTTTACTATGTCTGTAGATACAAACAAACCAAGAATGTGTTT
CCAATATTTACATCCACACATTTCTTTTTTTTTCGTAAACCTAAATCATCAAGATACAAATTAGATAAATACACACACACTACTGTGCAAGTAA
CTTCTTCACAGAATACTAACGAGAAAGTATTGAAACTTCTTTTTATTTCTGGGAAAGTTGCAGAGACAGAACCTGGTCAGCCTCTAACCTTCCT
TGTATTGAAGTAAAATGATAAAAGATCCGTTTTGATCTTCTTCTTGCTGCTGTCATCTTGAAGCTGAAAGAAACTTGTGGAATCTTTCTATTCT
ATACAACTTGCGTTGCTGGGATGATGAGTTGTCATGTGACGAGTTCTCGCTCTTCTTCTTCTTCTTCTTTATCTTCCTGTGGAAGAAATCCTCC
GTGTCCAAAACATACGAAATCTTGTAGGAAGAGCAAGACATCTTGCACTCGAGGCCATTAATTACTTCTACATTTTCCATTGCCTTGCAGGCTA
CTGCAAGATCATCTAGACCAGAGTATCCACGCATGTTCCTTTTTAACACAATGGACTGCGGCACTACTTTTTTCCCTGATGAGTTGGAAAGAAA
CTCTTTTTGCAGATAATTTGCAAACGTGGGATCCATGGAAACTGCACAAGCCTCAGGCTTTTCGATTATATTATCCATAAGCTGGATTGACAAA
TGAGGTGGAGAGGACGACTACATATGAATTAAATAAAACACACAAGTTTCAGGGTTAACC |
Primers for UN40804 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GAGACAGAACCTGGTCAGCC |
59.841 |
20 |
TCGTATGTTTTGGACACGGA |
59.964 |
20 |
237 |
251 |
487 |
2 |
GAGACAGAACCTGGTCAGCC |
59.841 |
20 |
TTTTGGACACGGAGGATTTC |
59.91 |
20 |
230 |
251 |
480 |
3 |
GAGACAGAACCTGGTCAGCC |
59.841 |
20 |
TGTTTTGGACACGGAGGATT |
60.353 |
20 |
232 |
251 |
482 |
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