 |
Simple sequence repeat (SSR)
>UN00373
GCACTTAATTCCTAGTCTCTCTATAATGTCTGTGCTTATGAGCTTCCTATAAGTGTTACACTTGCACCTAACTGTTACCTTTTCCGAAAATTTA
AATCATTCTTCCTACTAAACTTAAACTTAATAGATTGGAGTCAGTTGATACCCAAAAAATAATATGAAATCAGTTTGCAAACTAATAAAACAGA
TGAATGTTGCAGCCAGAGGGGGTTCTCTAATTCAGCCTATTACTTGGCTTTGCTGTTATTGACATCCTCGTCAACATCCATGGCGTTACTGTTA
ATGTCAATACCAACATCCACACTCTTCTTGTTGTTCTTGTCTGAGTTACTATCGCAATTCTCGAGGATGATATTGCAGTTATTGATGGGTGGCC
GAGTCTACAAGTCCAATGTTCCATAGTTTTATCATAAATAATCTCCAGCACCAGAAGAGTGGTGAAGAATGGAGCAACTCTTCCTTGTGAAACT
TTGAAAATGCTTCACATGCCCATGGTATATGACCATCCGCCACAACCCTTTGTTTTCTTACAAAAGAGTTCCAAAGATGCATGAATCTCTTTTC
GTTCTTATTCACATCCACAAAATCATCAAGCATCTGGCGATCTTCCAGATCTGCAACGTCATCATCCACTTCATCTTCGCTATCTCGATCAGAC
ATTACTTGCTCAAGTGACATTGGCTGAACTCTGTGAGAATGATAGAACTGGCGTTTCTGGAGAAGTAGGTTGCTTCTAGCCTCTGATCGCTCGG
CAGATAACTTTCTTGTCTTAGCAGCATGGGCCACAGCTTCGCTTGCTAACACAGCTTTGGCATTCGAGTTCATCGAACACTGAGCTATGGCTGG
TGAATTGTTCATCCCGAACTGTCCAGCAACATCTGTTGCCACGGGGTATCCTAAACTATGGTTTCCATTACTCAGCAGAGGGGTTCCATTATCT
GTGCCATTGGGTAAACTGGGCGAATCCATTGGTAAAAAGGTTACATTTAGTAGGCTGGGGTTAACTCTATGACCTCTTTGTCTACGCTTACGTG
GTTTCGAGCAAAAAGAGATGAGCTCAAATTTTTCTTGATGAATTCCTTCTTCCTCTGATTCGAATGCATCAAGCCTTACAGAGACATTAACTGT
CTGGTATTCTTCTGAAAGAGGGAACTCAAACTCAAGTAAGTCATGAAAAGAATTCAAATGAAGTTGTAGACCCTTGAAGGTACCGCATGTCATG
TAGCAGAATGGACAAGAACAATTCTCCGTAACTTCAGTTTTCTGCAGTGTGTTATTACAATCCTTATAATTAAAAACTACAATCCCAGCAGATC
CGGACTTTCTTTTGCCCTTTGCTCGAATTTTGTAGCTCAAGCATCTAGGAAGAAACGATGGGTTGAAAAGAGAGCGAATGCGAAGAATGTTGTA
GAGACGAACAGGTTTACAATAGATCAAGAGATTCTCGTCAGGTGGTGAAACCACTTCCTCCTCTTGTGACGATTTCGCGCAACAGTTCTGCCGA
CACATTCTCTCTCTGTCTAATCAAATAGCTGCTACAATTAGATCTCCGAATCACCTTTTTGTGTAGGAGTTGTCTGCAATTAGGATTATTCAAT
CAATGGATAGCAGATCCGAGGGAGTTTGAACCTACGAAGAACAAAGTCAAATCAAAGATCTCAAAGAGCTGAATTAGCAGCTAACATGAGAAGA
CAGCTCTCAGATGTGCCTGCCGGAGAAGAAGAGAGAGAGAGAGGGACGGAAACCGAGGATGAGAGAAA |
Primers for UN00373 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CAGATCCGAGGGAGTTTGAA |
60.187 |
20 |
TTCTCTCATCCTCGGTTTCC |
59.213 |
20 |
151 |
1609 |
1759 |
| 2 |
CAACAGTTCTGCCGACACAT |
59.751 |
20 |
TTCTCTCATCCTCGGTTTCC |
59.213 |
20 |
270 |
1490 |
1759 |
| 3 |
CGAGGGAGTTTGAACCTACG |
59.728 |
20 |
TTCTCTCATCCTCGGTTTCC |
59.213 |
20 |
145 |
1615 |
1759 |
|
|
