Simple sequence repeat (SSR)
>UN40873
GGAATTCCAGAGAAGTGAAAGAGATCAGGTAGGAAAGAAGAAGAAGAAGAAGAAGTAGAAGATGTCGTTGGTGTGGCTAGAAGCGGCTCTGCCT
CTGGGAATCATCGGAGGGATGCTTTGCATCATGGGGAACTCTCAGTACTACATCCACAAAGCTTATCATGGCCGTCCGAAGCACATAGGGCACG
ATGAATGGGATGTTGCTATGGAGAGACGGGACAAGAAAGTCGTCGAGAAAGCCGCTTCTCCTTCCTCATGATCCCCCTCAGGAGGTTAAGGTGA
ATACTTGTGCTCACACAATAAAAAAGGGTATTCCAGAAGAAGAGGAAGAAGCTGAAGAGTCTCATACCGTTATTCCTGTTTGATTTTTTTTTTT
TTCCTGCTTTCAGAATTCAGACCGTAATGGCATTTGGTTATAACATTATTTCTGTTTGTAATAATACATGCTTTTAAGTTGTATGATACACTGA
AGCTTACACTCTTCTAGTGTGAATGAATAATTATGTTGG |
Primers for UN40873 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCAGAGAAGTGAAAGAGATCAGG |
59.511 |
23 |
CATTCATCGTGCCCTATGTG |
59.948 |
20 |
189 |
7 |
195 |
| 2 |
CCAGAGAAGTGAAAGAGATCAGG |
59.511 |
23 |
CTCGACGACTTTCTTGTCCC |
59.844 |
20 |
229 |
7 |
235 |
| 3 |
CCAGAGAAGTGAAAGAGATCAGG |
59.511 |
23 |
TCCCGTCTCTCCATAGCAAC |
60.218 |
20 |
213 |
7 |
219 |
|
|
