 |
Simple sequence repeat (SSR)
>UN40936
GGAGAGAAAAAATAACGCTCTCTCGTCTCCTTCTGCAGCCCTAATTGCATCTCCACCCATTATTTCCGTTACTGTTATCTCAATCATCTCAGAG
ATGCCAATCATGCTCTAATAATGATTCTTTCGCCACGCCGTTACTGCGACCATTATTTCCGACTGTTATCTCAATCATCTCAGAGATGCCAATC
ATGCTCTCTCGTCTCCTTCTGCAGCCCTAATTGCATCTCCTCCCACACTCCTTGGCTCTGCGAATCCCTTCGCCGCCTTCACCAATCATCCTCC
TCCGCCAACAGTTGTTCAGTTTCAAGTTTGGTTCTCCGGCGAGGTCTGTGGATTTTGCTCTTGGAGATAAGGTTGCGGTTATTACCACTGACCC
CTTCATGGAGCGTATTTCTGCTATTACTGTGTTGATGCGTTGTTGCATAAGAATACAATCACATCGCTCACTAAAGCAGCTGATGATTCTCACT
TCATTACTGGTTCACTTGACAAGACTGCAAAGCTGTGGGACATGGGAACATTGACTCTTCTCAAGACTTACGTTTCAGGGGTGCCTGTAAATGC
CGTCTCCACTTCTTGACCATGTTGTGCTTGGAGGTGGTAAGATGCAGCAGCTGTTACAACCACTGATCATCGTGCTGGGAAGTTCGAGGCTAAG
TTTTATGACAAGGTTAGAAACAGAAGAGGGAAGCTTCATATACTTTACCTTCAAGACATGACTCATGAGCAACTGTGCCTTCTGGCTTAGAAGC
ACAGGGACCTGGAACATTGCGTTATGTCTGTACGAGCATAGATCGGGAGGTGTGGGAGCTGGAGGGACAATTTTCCTTGTCTTTTCCTCTAGTT
TCGTAAAAAGTCTGTCTCATGAGTCAAACTATATCTTTGATATAATAATAATAATACTCATGAATTTCATCACTAATATTATGACTCTCTATAG
ACAATTATTTCATTTACAATTTGAAGAATTTGTAAATGTTTTGCAGGATATTCCAATGACTTTGCCCATGACTTTGTTCATTTGTTTGCCC |
Primers for UN40936 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AGCATAGATCGGGAGGTGTG |
60.096 |
20 |
TGAACAAAGTCATGGGCAAA |
60.088 |
20 |
234 |
787 |
1020 |
| 2 |
TACGAGCATAGATCGGGAGG |
60.192 |
20 |
TGAACAAAGTCATGGGCAAA |
60.088 |
20 |
238 |
783 |
1020 |
| 3 |
AGCATAGATCGGGAGGTGTG |
60.096 |
20 |
CAAAGTCATGGGCAAAGTCA |
59.691 |
20 |
230 |
787 |
1016 |
|
|
