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Simple sequence repeat (SSR)
>UN40974
GGGGCACAAACAACAACTTTTCTTCTTCTTTCTCTCTCCTCTCTCCACTCTCTCTCTCTCATTGCGAAGATGATAGATTCTACCTTGGAGTTCG
TCAACAAAACCACTTCCAATTCTTTATTCATGTTTCTCTTCTGTAACTTGATCATCATCTTAATCCTCATGGGAAACTCTAAACAGGGTTCAGA
AGACAAGCTCGGTTCGAAGGAATCCATATTGGTATCTGAGTCTAGGACTCTCGACTCAAAGACCGATTTTAAGAAACCCATGTTGATACCTGAA
TCGGTTCTCTCTTCCAAACCCGTGTTAGTATCTGAATCGGTTCTCTCTTCCAAACCCGGTTTGGAGAAACCAGGGTTAATATCTGATTCTACTC
TCCCGTTAAATCCCGGTTTAGAAGAACCGGGAACGATATCAAAGTCGGTTGGCTCCTCCCAACCTGCGGGTTCTAATCCATCGTTGACTTCTAA
ATTCGGTTTGGATGTAATATCTTCTGGGTTGAAACTCGGTTCAGACTGTTTAGAGAAGGAGGACGAGATAGGGAGAATGAGAAAGAAAGAGAGC
TTGGTAGTAGAGAATGAGAGCTTGGAAGTGGAGTGTGTGCTTCGAAGACGAGCTGAAGAATTTATTCGTAAAGTTAATACTCAATGGAAACTAG
AGAATTCTTATCTCCAGTACTAATTAGAGTTTTGTTTGTAATTATCGAAATGCTCTTTTTCAAAAACAAAATGTTTTGTGGAAATGTTTTAAAA
AACAACAACTAGATTTTGATCCGAGATTCGACATCGCGGATTTTTTTGGATTGTATACAAAGTTTGTGAATTAATATTTTAAAATTGTTG |
Primers for UN40974 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GGGGCACAAACAACAACTTT |
59.875 |
20 |
CCGAGCTTGTCTTCTGAACC |
59.989 |
20 |
200 |
1 |
200 |
2 |
GGGGCACAAACAACAACTTT |
59.875 |
20 |
CGAGCTTGTCTTCTGAACCC |
59.989 |
20 |
199 |
1 |
199 |
3 |
GGGGCACAAACAACAACTTT |
59.875 |
20 |
TCGAACCGAGCTTGTCTTCT |
60.134 |
20 |
205 |
1 |
205 |
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