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Simple sequence repeat (SSR)
>UN40982
GGATTACAAACACGCCAGAACTCTATTTGCTTCCAAACCTCGCTTAAAGGGTCTCTCTGTATTCATCTTTCTGTCACAATTCTGAAAAAAAAAA
TTGAAGCTTGATTTGGTTCAACAGAGAGAGAGAGAGAGAGAGAGATAAAGCAGAGATGTGTAGTTTGTCAGCGAACATGTTGTTACCAACAAAG
CTGAAACCTGCTTATTCAGACAAACAGAGTTATTGTACCACCAACTCACTCCTTGTCTCCAACACAAGACCCAAGAGGAAGAAGAACCAATCCA
CTGTTCCTATGGCAAGATTGTTTGGACCAGCTATCTTCGAATCATCCAAGCTGAAAGTATTGTTTCTAGGGGTTGATGACAAGAAGCATCCACC
AACGCTCCCAAGAACTTACACTCTGACTCACAGTGACATTACAGCTAAACTAACTCTAGCTATTTCTCACTCCATTAACAATTCTCAGTTGCAA
GGATGGGCAAATAGGATATACATAGATGAAGTGGTAGCAGAATGGAAAAAAGTGAAAGGGAACATGTCTCTTCACGTCCACTGTCACATTAGCG
GTGCCCATTTCCTCTTAGATCTCTTCCCAAAGTTTAGATACTACATCTTTTCCAAAGAACTACCCGTTGTGTTGAATGCTATTGTTCACGGAGA
TGGCAACCTGTTGAACAGCTATCCCGAGTTACAAGAAGCTCTTGTTTGGGTTTATTTCCATTCTAATGTCGATGAGTTCAACAGAGTCGAATGT
TGGGGTCCGCTTTGGGAAGCTACTTCGCACGATGGTCACAGGACTCAGACTCTCCCTGAGACTCTGTGCAAGGAGGAGTGCGGTTGTTGTTTCC
CAACTGTTAGCTCCATTCCTTGGTCTCATAGTCTTACTAACGAAGGTGTTACAGACTACCCTGGGACTCAGGCCGAGGGAATGTCTACTCCAAG
TCCGGAGAAAATCTAGTGATTCAACTAATATACAAGTTTCTTTTTAGTGAAATCTTTTGTAGATCTAATATTGGTCTGGTTTGGTTTAGTGTAC
ATGATGTGGTATAGGAAAATAATGATTACTAGATTTTTACCCGCACGCCCGTGCGGATGTATATTTCAAAAATATATTG |
Primers for UN40982 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TATTTGCTTCCAAACCTCGC |
60.209 |
20 |
TGGGTCTTGTGTTGGAGACA |
60.129 |
20 |
238 |
24 |
261 |
2 |
CCAAACCTCGCTTAAAGGGT |
60.474 |
20 |
TGGGTCTTGTGTTGGAGACA |
60.129 |
20 |
229 |
33 |
261 |
3 |
GCTTCCAAACCTCGCTTAAA |
59.474 |
20 |
TGGGTCTTGTGTTGGAGACA |
60.129 |
20 |
233 |
29 |
261 |
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