Simple sequence repeat (SSR)
>UN40996
GGAAATCGGGTGAGAGAAGAGAGAGGTGCGGAAACCCTAGATCTATCGGAGTAACAAGGAAGCAATGTCGGATCCTTACGAGAGGGTTAACGGT
GGAAGGTTAGCCTTCAAAGGAGGTGATCTAGCCACGAGTAAGTCCATCGAAAAGAAGAAGAAGAAGAAGAAACAACAGAAGAAGAACAAGAAGA
AGCTCGACGAAGGCGCTGCTGACATTGAAAAGAACAACTTTTCAGCGAATTCCTCCACCCCCGCAGACGACATTTACTCTATCGACGCCGCAAG
AAGAAGAAGTACGACGATCTGTTCCCCGTGGAGGCAAAGAAATTCGGTTACATTCCCAAATCGAACTTCGAATCAGTAGCAGAGGCTCTTGACG
ATCGAGTCACGAAGAAGGCAGATCGCTACTGTAAATAGAATGTTTTACCATCCCAACTTGTATTCGTTATTGCATTGGTGTTTGTAGAATCTAA
TGACTTTATTTTGATAAGAGTTAAATCTATTTGTAGCAGTTAAGAAAAAAAAAATTGAGTTGTAGTATTATGTATTTCAATACTTGAGTTTACT
TCTGAGATATTCAGC |
Primers for UN40996 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TACGAGAGGGTTAACGGTGG |
59.986 |
20 |
TCTTTTCAATGTCAGCAGCG |
60.134 |
20 |
145 |
77 |
221 |
| 2 |
TACGAGAGGGTTAACGGTGG |
59.986 |
20 |
GTGGAGGAATTCGCTGAAAA |
60.192 |
20 |
170 |
77 |
246 |
| 3 |
AGCAATGTCGGATCCTTACG |
60.096 |
20 |
TCTTTTCAATGTCAGCAGCG |
60.134 |
20 |
161 |
61 |
221 |
|
|
