Simple sequence repeat (SSR)
>UN41002
GGAGCTAAATCACACCAAAACCCTAATCTCTCAAATCTTCCCCCAAACACCAAAAGAAAAAAAATGGTTAACCCTAAAGTTTTCTTCGACATGA
GCGTCGGCGACAAACCCGCCGGCCGCATCGTGATGGAGCTTTACGCCGACACAACCCCCGAGACCGCCGAGAACTTTGTCAAGAAACACACCGG
TCCGGGCATCCTGTCCATGGCCAACGCTGGTCCGAACACGAACGGATCTCAGTTTTTCATCTGCACTGAGAAGACGTCGTGGCTCGATGGGAAG
CACGTTGTGTTCGGTCAGGTTGTCGAAGGGATGGATGTCGTTAGGAACATTGAGAAGGTTGGATCTGACAGTGGAAGGACCTCGAAGAAGGTTG
TGATCGCTGACTGTGGTCAGCTTTAGATCTGGTGATGAGAAAGTGAGAGAGAGAGAGAGGTTGATCCAATGGTAGCTTTGTGTTTTTTCTGTTG
TGTTGTTTTTTCTTTGTTCCCGGTCTTCTCTTCTTCGTTTCGATCTTTGTGTTTCTGTGGCTACCATTGAATAATAATGATAATGATTAATCTT
AGTTATTAATGCTCT |
Primers for UN41002 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ACTGAGAAGACGTCGTGGCT |
60.057 |
20 |
GAAGAGAAGACCGGGAACAA |
59.259 |
20 |
251 |
253 |
503 |
| 2 |
ACTGAGAAGACGTCGTGGCT |
60.057 |
20 |
GAGAAGACCGGGAACAAAGA |
59.259 |
20 |
248 |
253 |
500 |
| 3 |
ACTGAGAAGACGTCGTGGCT |
60.057 |
20 |
ACGAAGAAGAGAAGACCGGG |
60.756 |
20 |
256 |
253 |
508 |
|
|
