 |
Simple sequence repeat (SSR)
>UN41159
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGCTGCGTGTGTGTGTGTGTGTTCGGCCGTTTTGGGGAATAGATTAGATAATGGGTGTG
GGAGGAAAGTTCTGGGATTTGGTGAGACCATATGGTCGAAACGAAGGTAGTGATTATCTGAGAGAGAAACGGGTGGCCGTTGATCTTTCCTTCT
GGATCATTCAGCATGAAACTGCCGTCAAGGGTTTTGCCCTTAAACCTCACCTCAGGCTCACCTTCTTCCGTACTATCAATCTCTTCTCCAAGTT
TGGAGCGTACCCAGTATTCGTGGTTGATGGAACACCTTCGCCCTTGAAATCCCATACCAGAATCTCTAGGTTTTACCGATCTTCTGGAATTGAT
ACCTCGAGTCTCCAAGAGGGCGTAGTCTCCGTTGAGAGAAATAAGCAGTTTTGTGAATGGGTTACCGAATGTGTGGAGCTACTTAAATTGCTCG
GTATCCCTGTCCTGAAAGCAAATGGTGAAGCTGAAGCTCTCTGTGCTCAGCTCAATAGCCATGGTTTTGTTGATGCCTGCATTACTCCTGATAG
TGATGCTTTCCTCTTTGGTGCTTCCTCCGTTATCAAATCCATCAAGCCTAACTCCACTGAGCCGTTCGAGTGCTACCATATGTCAGATATCGAA
GCTGGTCTCGGTCTGAAGCGGAGACACTTGATAGCCATCTCTCTTTTGGTTGGTAACGACTTTGATTCAGGTGGTGTTTCTGGGATTGGTCTCG
ATAAGGCACTTCGCATTGTCCGTGCCTTCTCTGAAGACGACATTCTCCAAAGACTAGAGGACATTGGAAAAGGGTTTAAACCTGCAGTGAGTGG
TGGAACCAAATCAGTGGATGTTGATGATGATGATGATGGTGTAGAATCAAGCTCCCAGATGAAAAGAAGATTGCCTCACTGTTCTCGCTGTGGA
CACCCAGGCAGCAAGAGAAGTCATTTCAAGTCCTCTTGTGAGCACTGCAGCTCTGATTCCGGTTGCATTAAGAAACCGTTGGAGTTTACATGTG
AATGCTCCTTCTGCACCAAGGATCGGGAATTAAAGGAACAGAAGAAAACCGAGAATTGGTGGATCAAAGTCTGCGATAGGATTGCTCTAGGCCC
AGATTTTCCCAACAGAAAGATTATCCAACTCTATCTATCCGACAGTTTCACAGAAGATGGGTCTTCAATGTCTTGGGGAACTCCAGATACGGAA
ATGCTAGTGGATTGCTTGGTTTTCAACCTGCACTGGGATCCTTGTTATGTTAGGAAAATGTTGCTTCCGATGTTGTCGACCATTTATCTAAGAG
AAAAGGCAAGAAGCAGCAACACGGGGAATCCCTTGTTATGCGACCAGTACGAGTTCCATTCAATCAAGTGCATGAAAACTAGATATGGGCATAA
GTCATTTGTGATCAGGTGGAGAAAACCCAGATCTACAAGTGGTTTAACTCCAGAGAAACCGATTGTTGTATGGGAAGATGAAGAAGAAGTGGTG
GAAGAGGAGGAGTGTGTTGGTCTCTTAGATGGGTTAAATGAACCACAAGTGCAAGATGATAACGGTGAATGCTTCTTGCTAACTGATGAATGCG
TAGGACTTGTCCAGTCTGCTTTCCCGGAGGAGACAGAGCACTTCCTAAAAGAAAAGAAACTGCGAGAGTCGAAAAAGAAGAATGTTTGTGAAGG
AGCAGCATCATCATCAGTGGGGGCACAAAGAAGTATAACTGATTTCTACCGATCAACGAAAGCAGCAGCAACACCAGCTCAAAGTGTAGACACA
GGGGGGAGCTCAATAGCTTTTGCTTCTGTTGAAAAGAAGAGACAAGCAACTAGTGGTAGCTTTTCAAAGTCTGTAAGGCGTCGTCTTTTGTTTG
GATAGAATAGTAACATATTCTTGTTTTTCTTAGTAAACCCAGTTTCAGGTCTGTGTAAAAAGGAGTTGTTTAACTTTGAATATTTTCTCTAATC
TAGTAGATCATCTTGTTTT |
Primers for UN41159 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GTCTCGATAAGGCACTTCGC |
59.985 |
20 |
AGCGAGAACAGTGAGGCAAT |
60.02 |
20 |
189 |
747 |
935 |
| 2 |
GTCTCGATAAGGCACTTCGC |
59.985 |
20 |
GTCCACAGCGAGAACAGTGA |
60.03 |
20 |
195 |
747 |
941 |
| 3 |
GGATTGGTCTCGATAAGGCA |
60.036 |
20 |
AGCGAGAACAGTGAGGCAAT |
60.02 |
20 |
195 |
741 |
935 |
|
|
