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Simple sequence repeat (SSR)
>UN41221
CTTACAAAAATTAGAGAATACATTAAACCAAAAACTAATTACAAACATTAAACCAAACCATAATTATCCTATGGTTTAAAGATAAACCTGGTTT
AGAAATCTAAAAAACTAAACCGGTTTAACATTAAAAAAAAAATTAACCCTATCTCAGCACCAAACTCTTCGCCGCCGTCAACTAACTCCATCAA
TCTGTGCTCTTCCACCACCATCGAAACTTCTTATCTGTCTCTCTTCCCTTGCCTCTGAACCAACTCCATCTCCTCTTTTTATCTTGCTCGACTC
AAACTCCATATTTCCTTAAACTCTAGGTTTTACGGATCTACAGAAGTAGAGACACCAAAACAGTCGTCGTCTTCCTGCCTCAACCCGCGGTCTC
TTCCTGAAAACTAGTTTTCTATACACAAAACCGAAAAAAGATTCAAACTTTCACGGCAAATCATTTACAAAAAAAACAGAGACGAAATCAGGAT
CGAGAGAGAGAGAGAGGTGACGAGTTTCTGACTGAAAGAAGGTGGAGGTGGAGATTAGGTGACGACAGAGAGAAGTTACCAGTGGTGGTAAATA
AGATCCAATCATTAGCTCAATGGAGAAGAAGAAATAAGATAATTGATTCGAAAATCAAACCAAACCGCTCTAGGAACAAATTAGACAAAGTTGA
AAAAGAGTAATAAGATTAACAACAAAAAAAACATGGAGAGGAAACAAAAGAAGAGAAGCGACAATTCC |
Primers for UN41221 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CAAACTTTCACGGCAAATCA |
59.706 |
20 |
TTGTTCCTAGAGCGGTTTGG |
60.241 |
20 |
224 |
420 |
643 |
2 |
CAAACTTTCACGGCAAATCA |
59.706 |
20 |
TGTTCCTAGAGCGGTTTGGT |
59.734 |
20 |
223 |
420 |
642 |
3 |
CAAACTTTCACGGCAAATCA |
59.706 |
20 |
CCACCTCCACCTTCTTTCAG |
59.691 |
20 |
102 |
420 |
521 |
|
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