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Simple sequence repeat (SSR)
>UN41716
GGAGTTGCGTGTTTGGTTATCTTTTCTTTCGTGTAACCTAAATTAAGGGATTTGTTCTAACAAATCTCTCTAGACTCCAAAAAGGAAGAATCAC
GTCTCTCATCTTCCTCTCGGGAAGATCAGAAAACAACTTCTTTTTGTTTAAATTTCATCCTCAAGCTTCGAAGATCGCAGGAAAAATTCTCGTT
TCGATCTGACCATTTCTGGCAGGATTTACAACAACAACAACAATGAGCTCTGGGCAAAACAACAGCACAAGCTTCCCACCAACAGAGCCAAAGC
TCTGCGATAACGGATGCGGGTTCTTCGGGTCACCCTCCAACATGAACCTTTGTTCCAAATGTTACCGAAGCCTACGTGCCGAGGAAGATCAAAC
GGCGGTGGCAAAAGCTGCGGTGGAGAAATCACTGAAGCTTCCATCTTGCAGTCTCATCACCGCACCAGAGCCAAAACAGCCTCTGGAGACCGAA
CCGGTCTCGGTGGAAACCGTTGTGATCGCTGAACCGACTTCTGTTCCTCCTGTAGCTACGGGACAGGAGGAGGGAGAGCCGTCGAAGCCTGCAC
GGCCTAACAGGTGTTTCAGCTGTAACAAGAAGGTTGGAGTTATGGGGTTTAAGTGCAAATGCGGGAGCACGTTTTGCTGGAGCCATAGGTACCC
GGAGAAGCATGAGTGTAGCTTCGATTTCAAAGAGGTTGGACGCGGTGCAATCGCAAAGGCAAATCCTGTGGTCAAGGCTGATAAAGTCCAGAGG
ATTTGATTGTGATGTGTCTTATCTTTCAGTTTATTCCGAGAATGCTGCCGTGATGTGGTCATGTTCGATGTTGGGTTTCTATGAATCAAAATGA
AAAAAATGCTGCTATTGGTTTTAAGG |
Primers for UN41716 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ATCTGACCATTTCTGGCAGG |
60.073 |
20 |
GGCTTCGGTAACATTTGGAA |
59.938 |
20 |
163 |
192 |
354 |
2 |
CTGACCATTTCTGGCAGGAT |
60.073 |
20 |
GGCTTCGGTAACATTTGGAA |
59.938 |
20 |
161 |
194 |
354 |
3 |
TCCTCTCGGGAAGATCAGAA |
59.879 |
20 |
GGCTTCGGTAACATTTGGAA |
59.938 |
20 |
249 |
106 |
354 |
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