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Simple sequence repeat (SSR)
>UN41846
GGGATTCTCATTAAGATGGTGGCGAAAAAAGAAGCGGCGCAAGTTAACATAATGATGAACTCAGCGTATCGAAGCCTTCACTTGACAGCGTCTC
GTCTGATAAACCCTAACCCCATCTCCTCTTCTCTCCTCCATCTTCTCCCTCTCTACTCCATCAACGCTTCTCCTCTCCGCCGTCGAAACTTAGT
GACTCCTTTCTCCTCCTCTTCTTCTTCCTCTTTGTACGCTCCTATGGCGGGAGGAGATGGCCAGGTTCCTCCACCGGAGTCTCATTTGCTGGAG
AAGCAGTTCGAGAGCTTCCGTGTTCAGCTCGAATAGTCTGCAGCTTTGAGAGAGCAGATTCGTGCTGTGGTTATGGAGATTGAGTCCGCCACTA
GGCTCATTCAAGCTAACCTCCTTCTCGTTCATCAATCTCGACCCATTCCGGAGATTATCGAGAAAGCTAAGGAAAAGGTGGATGATTTGAAGAA
GTTCTACGGTCGGCTTGCTGAGATCCTTCAGAAATGTCCTGGACAGTACTATAGGTACCATGGGGACTGGAGGAGTGAGACACAGGCAGTGGTC
TCCCAGCTCGCTTTTATGCACTGGCTAGAAACTGGAACTCTTCTTGTGCATACCGAAGCTGAAGCAAAACTTGGGTTGAACAGTTTGGAGTTTG
GACTGGAGACGGAAGATTATCTGACTGGAATATGCTTCATGTCAAACGATTTGCCTAGGTACGTGGTGAATAGAGTAACAGCAGGAGACTATGA
CTGTCCAAGAAAGGTGATGAACTTCTTGACGGATCTTCATGCTGCCTTTCGCATGCTCAACCTCAGGAACGATTTTTTACGCAAGAAATTCGAC
AGTATGAAATATGATCTAAGAAGAGTGGAAGAAGTGTACTATGATGTTAAGATCCGAGGTTTGATTTCTGGTGGAGATCCTCCTCCTCCTCCTC
AAGTCCAAGACCAATCCTAAATTAGGATCTTTCACTCTCGTTTGCTCTTTGCAACTTTGTTTAGCTAATCATGAAACAGCAAGGAGTGTTTTTC
TTTAAGACCCAAAACAGCAAGGAGTTTGTTTCTGTAAAACTAAAACGGCAAGGAATAGGCAGATCATTTTGGTTTCTTG |
Primers for UN41846 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GGATCTTCATGCTGCCTTTC |
59.78 |
20 |
TCCTTGCTGTTTTGGGTCTT |
59.711 |
20 |
275 |
783 |
1057 |
2 |
TCCGAGGTTTGATTTCTGGT |
59.526 |
20 |
TGATCTGCCTATTCCTTGCC |
60.177 |
20 |
202 |
899 |
1100 |
3 |
CCGAGGTTTGATTTCTGGTG |
60.486 |
20 |
TGATCTGCCTATTCCTTGCC |
60.177 |
20 |
201 |
900 |
1100 |
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