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Simple sequence repeat (SSR)
>UN41850
GTAGCTCGATGGACCCTCTCAAGCTTTCCTACGAAGCGCGTCTTCACGCTTCGCAGAACAAGAGGTTACCGGTAAACATCGTGCTTCACGCGCT
TTACTACGATCAGCTAAAGCTGAGAAGCGGTGTCGAAGATAGAGAAGGAGCAGTGGTTGTAGTCCCTGAGGCTGCAGCCACGCGTGGACAGGTT
AAAGCTGATGCTTCGTTGGCTAAAGAGAACGAAGCTTTGAGGAGCGAGCTGATGAAGATGAAGATGTATGTTTCGGATCTTCAGAAGAACGGTG
GTGCAGCTGGAGCTTCTTCTTCGAATGCAGTGCCGAGCAATAAGAAGAGCGGCAAAAGTAGTTTCTTCTCGTCTGTTTCGAAGAAGCTTGGGAA
GTTGAATCCGTTTAGACATGGGTCTAAGGATACTTCGAACATTGATGAGGATCTTGCTGGCGTTGATATCACTAAGCCAAGAAGACGAAGATTC
TCTATTTCTTAAATGGGGAACCAAAACGTTTGAGCAACTACTTTTGCGTTTTTGTTCCTTGCGTGTGTGTGTGTCTGTCTAGCATAGTAGTGTA
CTACTCTTTTTTCAATTTTTTTCTTCTACTGATGAGTGATTTATTTTGTTTTTGGAATGTGTGTTTATTGTATAATAACTAGTGTGATATTAAA
AAAGTAAAGAAAATCTATACCACC |
Primers for UN41850 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CGAAGAAGCTTGGGAAGTTG |
59.986 |
20 |
AAACACACATTCCAAAAACAAAA |
58.491 |
23 |
270 |
361 |
630 |
2 |
CTGTTTCGAAGAAGCTTGGG |
59.986 |
20 |
AAACACACATTCCAAAAACAAAA |
58.491 |
23 |
276 |
355 |
630 |
3 |
TTAAATGGGGAACCAAAACG |
59.671 |
20 |
AAACACACATTCCAAAAACAAAA |
58.491 |
23 |
152 |
479 |
630 |
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