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Simple sequence repeat (SSR)
>UN41996
GGAAAGTAGTTCGTCGCCGGTGATAACCTCTTTCGTTTCCTCTAACAGCTGCTCTCAGCGAAGAAGAAGAAGAAGATCCACTAAACCTTAACAG
TCTGCAGCTATGTCGAGGAGAAAGACAAGAGAACCCAAGGAGGAAACAGTGACTCTAGGACCAGCTGTGCGTGATGGTGAGCAAGTCTTTGGAG
TTGTTCATATCTTTGCTTCCTTCAATGACACCTTCATCCATGTGACTGATCTGTCTGGAAGGGAAACTCTCGTTCGTATCACTGGTGGAATGAA
AGTGAAGGCTGATCGTGATGAGTCCCCTCCTTATGCTGCTATGCTTGCTGCTCAAGATGTTGTTCAAAGATGCAAGGAGCTAGGCATCACAGCC
ATGCATGTGAAGCTCCGTGCTACTGGTGGGAACAAGACCAAGACTCCAGGTCCTGGTGCTCAGTCTGCACTCCGAGCTCTTGCTCGTTCTGGCA
TGAAGATTGGTCGCATTGAGGATGTGACTCCAATCCCAACCGATAGTACCCGTAGAAAGGGTGATAGAAGAGGAAGACGTCTCTGATTTTGTCT
TTCTCACAATGTCCCCCTGCTCTCATTGTGGTGCTACTTCTAAATTCCCCCATATAACTCTTTGCTATTGTTTTTATAAGA |
Primers for UN41996 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CGCCGGTGATAACCTCTTT |
60.081 |
19 |
TCCACCAGTGATACGAACGA |
60.112 |
20 |
263 |
15 |
277 |
2 |
GTCGCCGGTGATAACCTCT |
60.088 |
19 |
TCCACCAGTGATACGAACGA |
60.112 |
20 |
265 |
13 |
277 |
3 |
CCGGTGATAACCTCTTTCGT |
59.052 |
20 |
TCACTGTTTCCTCCTTGGGT |
59.549 |
20 |
130 |
17 |
146 |
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