 |
Simple sequence repeat (SSR)
>UN42004
CTAAGCTTGAGTTCGTGCCATAAAACCAAAAACATAACTGATCATCACGTAAATAGAGGAAATCGAATATATCGATTATAGAGAAAAAAGACAT
CCTAAGATAAAGTAACAAAACGATTTGATGGACGTGTACAGGAAGCAAAACAAAACCATAGTCACAGGGCTTAGGACCGCTCTGTTTGGAAAAC
GTGAACTAGCAGACATTAATTCCTCGAGGAATGTATTATCTAGCAGGAGGAGGAGGAGGGCCAAGGGATTTAGCCATGCCAACCCAAGCAACAA
TCCCACAAGCGAGAATGATCCAACCACATACATCGTAAGTGAAGTCGTTGTTAACCTTCTTATTCTTCTTCTTACCACCGCCAGCATTTGATGA
AGCTGAGGGACCCCCTCCCTCCTCCACCTCCACCTAATGACTGCTGCATCATCATCCCATCCGCATGTATGTTCATATGCAGCGCCGGGGCCCT
TGCTGTAACTTCCAAGGACTTGAGGTACATCTCATTACCTGGATCCTCATTTTCAGCTTTTTGGAAAAAATCAGTGGCTTTATCAAAGTGAAGT
TTGGCAGCATCGGGATCAGGGGTAAGGAAGGCGTGGGCGGTGTAGGCGTTGCCAATACACCAAAGAGCCTGATGCTTCCCTGGATTTATTGTCA
ACACCTCTTCCAACTTTGAAACAGCATCATCTAACATGAGGCATCGGGAATAGCCTGAACTGAGCAAGCTCAAGTAATGCTCCACCCCACTGCA
GCAGATTCTCGGAATCGAGTGGATCCTTAACGTACTGAGCCTCACAAGCTTTGCGAGTATGCTCGAACATCACAAGCCTTTCAAAGTCGGCGGC
ATTGAATTCCATCGTGAGTTGATGATGCGGTGGGAGGAGAGGGAAAGAAAAAAAAGTTAGGGTTGGGGTTCTCTTTTTGTGTAAATTATTACAA
GACCACCACGATACGAAAACCAAAGACCTTCTTCCC |
Primers for UN42004 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCTTAGGACCGCTCTGTTTG |
60.015 |
20 |
TCAGCTTCATCAAATGCTGG |
59.948 |
20 |
220 |
163 |
382 |
| 2 |
GCTTAGGACCGCTCTGTTTG |
60.015 |
20 |
CATTAGGTGGAGGTGGAGGA |
59.92 |
20 |
253 |
163 |
415 |
| 3 |
GCTTAGGACCGCTCTGTTTG |
60.015 |
20 |
TCATTAGGTGGAGGTGGAGG |
59.92 |
20 |
254 |
163 |
416 |
|
|
