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Simple sequence repeat (SSR)
>UN42030
CACATCTACAGGGGCTCTATTTTATTGTTTGGCCTTTAGTAGGATTTTCTGTAACATCTACAGGGGCTCTGTTTCATAAGAACTAGAACTACAG
GGGCGGCTCTGTTTCACAACAACTAGAAGTTCCATAACCCCCATATGTAGATGTTCCACAAAACTATTGTTCCTGATGAAAACTAGTTACCAAA
GTAAAGGAAAAAAAAAAGAAGCTATTGAAGTCCATATCTTTCTCGCTCTCTCTCTCTCTCTAATCCTGCTTCTCCTTCTTGTTCTCCAACTTCT
TCTTCATCTTCTCCTCACCTGGCTCATTCTCATGATTCTGGCTTGCCAGCTTCAATTCCCTATCCCAACCTGACTTACGGATCTGAACTTTTCT
AGACGGATTAAGAACTTGGCTCGTGTCTAAAGCAGCTCTCCGGTCTGGTTGTTCCCATTTTCTAGACGCTTCAGGACAGTGCTTCTTGCGTGCA
GACAGATCGTCACTGCGAGGAATTGGCTTGTGTCGCCATCCTAAGCAGCTCTCTGTGGAATTTGGGGAATAGAAGTAAACCCATCATTAACGTT
GATGGGGTCTGGTCGTTTCCGCAGGTAGTAAGGGATGTCCCGTCTTTCTCTCCC |
Primers for UN42030 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ACTAGAACTACAGGGGCGGC |
60.65 |
20 |
AATGAGCCAGGTGAGGAGAA |
59.803 |
20 |
229 |
82 |
310 |
| 2 |
CGGCTCTGTTTCACAACAAC |
59.339 |
20 |
AATGAGCCAGGTGAGGAGAA |
59.803 |
20 |
213 |
98 |
310 |
| 3 |
ACTAGAACTACAGGGGCGGC |
60.65 |
20 |
CATGAGAATGAGCCAGGTGA |
59.787 |
20 |
235 |
82 |
316 |
|
|
