Simple sequence repeat (SSR)
>UN42044
GGGTCCACAGAGAAAAACCCTAAAGAGAGAGAGAGAGAGAGAGTTTCTCCACAACCCGGCGGCGAAAATGAAGTACAACCCAAGAGTCACCTCC
TCCCGCAGGAAGAACCGTCGTAAGTGGGTGATTCACATCGAGAGGATCACGAGGGAGAAGGTGAACGGAACCACCGTGAACGTCGGCGTGCAGC
CGTCGAAAGTGGTGATCACGAAGCTTCGTCTTGATAAGGACAGGAAGTCGTTGTTGGAGAGGAAGGCGAAGGGTCGTGCTGCTGCGGATAAGGA
CAAGGGTACCAAGTTCACTGCTGAGGATGTTATGCAGAACGTTGATTAAGCGAGAGATTTGTCGTAAGGTTTTTTTATCGTTGTTTCAAATTTT
GTTATATCGAATGTTTTATTTATGTTTCGAACATGAACATCTGTCTTTTGGTTTCAGTTTCGGTAATGAGTTCTACTCTTTAGCCTTTATCTAC
AGTTTAATTGATGCTTTTAATATTGAATGTTTGCTTGCGCTGATC |
Primers for UN42044 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGGTCCACAGAGAAAAACCC |
60.725 |
20 |
CACCCACTTACGACGGTTCT |
60.028 |
20 |
124 |
1 |
124 |
| 2 |
GGGTCCACAGAGAAAAACCC |
60.725 |
20 |
ACCTTCTCCCTCGTGATCCT |
60.073 |
20 |
156 |
1 |
156 |
| 3 |
GGGTCCACAGAGAAAAACCC |
60.725 |
20 |
CGTGATCCTCTCGATGTGAA |
59.787 |
20 |
145 |
1 |
145 |
|
|
