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Simple sequence repeat (SSR)
>UN42045
AGCAAAATTTCATTTCGGTCAGTGCTGTTACATTTCATCTCATATATATGCCAATGTGACCGTACTGCTGTTTGTATGAAGATCATGAAAACCT
TTTTACACATATGATGCAACCATCGGTTCTTAATTACATAATGGGAAACATCAAAAACAATGTAGAAACACGATATCAATGTAGAGAGACTCTG
ACTCGGTTCTGTGACTGAAGCGCCAGCTAAACATGAAATTTTACTGATTAAATGTTTAAAATGTTGACACCATGCAGCTTACTATGATCTTGAA
CTGTGACCCTGTAACTCGATCTTCCCTGAGGTGTAGACTCGGAATCCGTTGGTAGAGGAAATAAGCTTGATACGTTTTTGTGCATTGGTTGATC
TGTGATTGCATCTATATAGCTTAGGCACATGTACTGGCTTAACGACGCACGTGTTTTCCATGTCGGGGATTGCGTGGAGTTGGGAAGGGAGATC
GATTTCAAACTCTCCCAAATCATCAGTAACAGCTTTAATCCATTTGGATCTCCTTTTGTATCCAGTCTGGCACTTTACAGCAACCGTTGCACCT
GGAATAGCTATAGAGGAAAGTTGAGGACGTGAAGTGTCGCAGAGAAGAGATCCAGTGATGATTACGGAAGAGAGTTTCTGTTCACCGTAGCCAG
CCACCTCCACCATCTCTGTTCTGCTCCATATCTTCCCTGCAGCTGCAAACGCTCCTTCAAACAAGAACAAGAACAAGAACAAGAACAAGAAGAA
GCAACGTAACATGAATAAGCTTCCCATTTTAAATGTTTACTTTCTGTTTC |
Primers for UN42045 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AACCGTTGCACCTGGAATAG |
59.993 |
20 |
TGGGAAGCTTATTCATGTTACG |
59.143 |
22 |
227 |
552 |
778 |
2 |
CCACCTCCACCATCTCTGTT |
59.962 |
20 |
TGGGAAGCTTATTCATGTTACG |
59.143 |
22 |
120 |
659 |
778 |
3 |
GACGTGAAGTGTCGCAGAGA |
60.187 |
20 |
TGGGAAGCTTATTCATGTTACG |
59.143 |
22 |
189 |
590 |
778 |
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