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Simple sequence repeat (SSR)
>UN42048
GGACAACGTTCTTGTCATCTCCTTCATATTCTCCTCCTTTATCTCTCTCTCTCTCTCAACTCTTTTTCAGGCGCAACCAAATAGAAACATAAAC
ACTTAAGAGCATAAACCAACCATAGATTCTTGGGACACTTCTTAGTTTTGACCGATTCTGATCCGTTATAGTTGTTTCAAACGACACGGTGAAA
CGTTTGTTCTTATTTAAAATATCATACTCCTCTTTTCTTTCTCCTCCTTCTCTATCGAAACAATGTGCTGATGATTTGCTACAAAAAAAATTGC
GGCTGATTGTGATGGGAGTTTTATGGACTAATGGATCTCTGTAGATAGAAATAGATGTGGTCTCCAATTAGAATTGAGAGAGTGATTTGAAGAG
CAGGTGCAGAACAGGAACAAAAAAGATGGGTAGATCTTTTAGGTTTAATTTGGAGCAATGAAAAAACATCATGATTTAAGAAGTCCTGTGTGTT
GTGTTTATAACGTTTTTGCATGATTTACTTAAGGGATGATGAAGGATTAGGAAGATAAACAAAGAGTTCAAGCAAGACATGTACAATGTGTTTC
CCTCTGTTTATTTTTTAATCTCATCTCTCTTTAAAATTTGCAATGTAGACATTTGATTTCATGTTGATTTTTGTGATTGAGAATTACTAAATTA
TGC |
Primers for UN42048 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GGACAACGTTCTTGTCATCTCC |
60.923 |
22 |
GTTTCACCGTGTCGTTTGAA |
59.591 |
20 |
189 |
1 |
189 |
2 |
GGACAACGTTCTTGTCATCTCC |
60.923 |
22 |
AACGTTTCACCGTGTCGTTT |
60.453 |
20 |
192 |
1 |
192 |
3 |
GGACAACGTTCTTGTCATCTCC |
60.923 |
22 |
AAACGTTTCACCGTGTCGTT |
60.453 |
20 |
193 |
1 |
193 |
|
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