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Simple sequence repeat (SSR)
>UN42166
TTTTTCGTCTCTCTGTTCTGCCTGTAGCTGGTCGTGCATCTAACCTGCTGTTGTATCTTTTCATCTTCCCATAGTTAAGATCTTTGCCAACAAA
AATAAAGAAATGAACAAAACTACAAGGATCGATATCCCCTCTTCCTCTTCTCCATCTTTAGCTTCCGCAGACGGAGAGCTCCACGAAGACGACA
TCTTCGCAATCGACATAACTCACGCGCCTCGTCCTTCTCCAACGCGACAACAGCAACAACAACATCCACAAGCTCGTCAACTTCAAAGAAGCAA
AAGCAGTTTAAAAAACGTGGAAGCTTCTGGCATCCTCGCTGCTCTCCCCGAGCTATCTGGAAACAGTTACCTCGACCACGTGTTTCACCACAAA
CCCGCCTCTGTTCTCTCCACTTCGGTCTCCTCCACAGCATCTTCATCCTCTTCCTCCGGCGGCGGCGGCGGTGGTGGTGCTCGAACCATCCCCG
CTGCTGCTCCTAAACCGCCTCAAGAACGGCTTCCGTTCACCTCTTCTTTTATAAACGGAGGGAAGTTTCCTCAGTCAGCTCCCGTTCAAGTACC
GTCGGCGATGATGAATCGTCATAAGAAGGAGTTCAAGCTGACTGATGTGGTGGATGATGATGAGGAGGAGGATGAAGAAGAGATGGGGAG |
Primers for UN42166 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CACGTGTTTCACCACAAACC |
59.897 |
20 |
CATCCACCACATCAGTCAGC |
60.121 |
20 |
262 |
359 |
620 |
| 2 |
ACCACGTGTTTCACCACAAA |
59.897 |
20 |
CATCCACCACATCAGTCAGC |
60.121 |
20 |
264 |
357 |
620 |
| 3 |
CCACGTGTTTCACCACAAAC |
59.897 |
20 |
CATCCACCACATCAGTCAGC |
60.121 |
20 |
263 |
358 |
620 |
|
|
