Simple sequence repeat (SSR)
>UN42188
TTTTTTTGACATCAAACTCATGTCTCTCTGTCTCAAGAACTTAAAAACATGAAATAAATTACCAGAGTGATCAAAAGAAGCAAAAAGTCTTCAA
TTTTTTCTGTCTTTCATCTAAAGATATAAGACAAATAATAAAAAAAGGCAGGAATTTTAGTTTCACTCGTCTTCATCGATAACCTTGGTGCCCA
AACCAGACAATCCTTCGGCCGGAATCTCAGCGACAGTGACGAGAGAGTAAAACTCTTCTTTGGCATCTTCATCATCGTTCCTCTTCCGGGCAAC
GCGGACTCTGACTCTCCTAGGAGGACCACGGATACCTTTGCTCCAAATCTGCTTGTTGAGCTTGACGTCTACTCTGACGTCCTTGGTTCCCATT
GCTTTCAATGCAAACTTCCTGATCTCTTTGATGGCATTGGGTGCCTTCTTCTTGAATGTGCAGCTATGGAGGCGCCTGTGGAGATTGATAGTGT
ACTCCCTGGTAACGATCTCCTCCTTTCTTCCCTTTCCTTTCTCCATTTCCCTCTCTCTCTCTCTCTCTCTCTTCAGAATGGAGTTGTTGGAGAC
GGCACCC |
Primers for UN42188 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ATCTCTTTGATGGCATTGGG |
59.894 |
20 |
CCGTCTCCAACAACTCCATT |
59.966 |
20 |
169 |
398 |
566 |
| 2 |
AGGAGGACCACGGATACCTT |
59.817 |
20 |
CCGTCTCCAACAACTCCATT |
59.966 |
20 |
266 |
301 |
566 |
| 3 |
GGAGGACCACGGATACCTTT |
60.19 |
20 |
CCGTCTCCAACAACTCCATT |
59.966 |
20 |
265 |
302 |
566 |
|
|
