Simple sequence repeat (SSR)
>UN42197
TTTTTCACTCCTCTCACCAGAGTTATTCCTACTAGTAAAAGTTTTATCTCAGATCTAATCTCAATGGAAAAATATGAGAGACTAAGTGAAGAAG
AAACTTGTTGGTGGATACTATTTAAGTTCCTCGACCAAATTCTTAAAGCTATCCTCAAGTGCCTTGGTCTTCTTCATCATGATTCTCCATCCAC
GAAAACGGAGTCGTCTCCGGTGACTTCAAACCAGCCGTTGCAGGAAGAAGAAGAAGAAGAAGATGTTGTGATGGCAGAAAACGCCACTATAACG
AGTACGGGGAGTAAAATCGTTGTGACGAGTAGAGGGACAAAGATGAAGGCAAAGCCAAGGAAGAAGGAAGAGAAAAGCACGGGCCGTTCTGGCA
AACATCACAAATACGATCTTTAGCTCATTTAATTTGCAGTCTAATGTGTTCTATTTACAGTGCACTCAATGTTATTTACTAAGTACTACGTAGC
ATCAGTGTTATTCATATTTCTGTTTGAGATTTGTGTGTTTAATAATATTAATAACTTATGCCAGT |
Primers for UN42197 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCATGATTCTCCATCCACGA |
60.006 |
20 |
TTTGCCTTCATCTTTGTCCC |
60.051 |
20 |
165 |
171 |
335 |
| 2 |
ATTCTCCATCCACGAAAACG |
59.933 |
20 |
TTTGCCTTCATCTTTGTCCC |
60.051 |
20 |
160 |
176 |
335 |
| 3 |
TCATGATTCTCCATCCACGA |
60.006 |
20 |
TTGGCTTTGCCTTCATCTTT |
59.823 |
20 |
170 |
171 |
340 |
|
|
