 |
Simple sequence repeat (SSR)
>UN42216
GGAATCTCCGACATCTCAAGCTCTCTCTTCTCCATACCCAGAACACCACAAGCTCTCTCTTCCATTCACATATCACCACCACGAGTTCTCTTCC
CCCATACATGAAGACTTCTCTCTCTCTCTCCCCCGATAGACACAGACCTCGAGCTCTCTCTCGTTCTCTCGATCTCTTGAAGCTCATCTCATCT
CACTCTCTGATGTCACGTGCAATAACGCTACCGGTGCAGTCCCTAAGTTACATCTCCCAAACGGCTGCTTAACTGGAACGATCAAAGCCAACAG
TATCCTCTTCGAGCTGCGTCATCTTCGTCACCTCAATCTCTCTCCATCTCCAACGCATCTCGAGCTCTTTATCTCTCTCAAGCTCTCCATCTCG
GTTCGTCTCAAGCTTCTCTCACTCAAACTTCTCTCACTCAAGCTTCTCTCACTCAAGCTCACTCTGTTTCTGATTTGCAGAGCTTTGACATACA
TTCATGGAGGAGTAGGAGTCTGCCACAGAGACATAAAACCACAGAATCTTCTGGTTAATCCTCATACACATCAGGTCAAGCTCTGCGACTTTGG
TAGCGCTAAAGTTCTGGTGAAAGGCGAACCAAACATCTCATACATCTGTTCCTTGGACAGGCTCTCTCAGCTTCTCCATAGCATCTCAGTTTCT
CAGGCTTCTCCTAAGCTTTGTCTGTCTTTCACTCTCTCGTATCAAGCTCTCCCAAGCTTCTCTCACTCAAGGTCTCCCAAGCTCTCCCAAGCTT
CTCTCACTCAAGCTCTCCTTGCGTGTCTGCATCCAAAATATGGTCTGGTCAAGTGGATTAAGTTGGCGACAGCGACGATGGCGTTACACAATTT
CATACGTGATTCACATCGGGATGATCAAGATTTTTTAGAATGGGAAAATGTTGATGTTGGAGTTGAAGAAGCTCATAGTGATGGTGAAGAAGAA
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGGTGATGATGGTGGTGGACATATTGAATATGAACCGA
GAGGTGATACAGCAATGGAGGCTTTGCGTGATAACATCACAAACGGATTTGGTAGAGGTCATTTACCATATTAAATCATGTTTAAGTTAATAAT
TTGATTTTTTTTTAAGACTTGTTGTAATATTTATTTTATCAACCAACTT |
Primers for UN42216 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CATACGTGATTCACATCGGG |
59.799 |
20 |
TGATGTTATCACGCAAAGCC |
59.694 |
20 |
227 |
847 |
1073 |
| 2 |
ATTAAGTTGGCGACAGCGAC |
60.278 |
20 |
TGATGTTATCACGCAAAGCC |
59.694 |
20 |
265 |
809 |
1073 |
| 3 |
ATTAAGTTGGCGACAGCGAC |
60.278 |
20 |
GCCTCCATTGCTGTATCACC |
60.492 |
20 |
248 |
809 |
1056 |
|
|
