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Simple sequence repeat (SSR)
>UN42246
GGATCCTCGGCCTCCTCGTTTTGCACACTCTCCTTTCCATTTCTCTTGTTTTCTTCTTATTCTTTGTAGCCTCCCTCCCTCCCTCTCTCTCTCT
TTCTCCTTCTCCTGTGTCTTACACAATTAATGGCGTCTTTAAATTTGAAGATGAAGAAAAGGGAGAATTATGGCACCGAACCTGACAAGAAAAA
ACTGGCTATGACCGGAATCCGACACCAGTTACTGCTACTCCTTCGCCGCCGTCACCGTTTATTTCCTCTGGTCTCTGCCTTCTCCGGCTGTCTC
CTCCTCCTCCTCCTCTTCTCCTTTTCCTTCCCTCCTGTGATCCATCGCTCACCACCAGGTAGGAAGAATCAAATTGCCGTGGAACCCAAGCTTC
TTGTACCCGAAAATGGAGGAAGATCGGATCGGCACTTATGGAGCTCGAAATTGTCCAACTCCTACTATGGCTGCAGCAATGCCAGTGACACCTT
TCAAGTTTTGGATAAGACGAGTCAAACAGATCGATATCTACTGATCGCTACGAGCGGAGGGTTAAACCAACAGCGAACAGGGATAATAGACGCT
GTGGTTGCGGCTTACATCCTAAATGCCACTCTTGTGATCCCTAAACTGGACCAAAATTCATACTGGAAGGACACCAGCAACTTCGAAGAAATAT
TTGACGTTGATTGGTTCATTACGCATCTCTCCAAAGATGTCAAGATCATCAAGGAGCTTCCTAAAGGAGAGAGTCAAGACTCACTGGCTACAGT
CCATTCGTGTTCCCAGGAGTG |
Primers for UN42246 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCTTTGTAGCCTCCCTCCCT |
60.204 |
20 |
GTCAGGTTCGGTGCCATAAT |
59.82 |
20 |
120 |
61 |
180 |
| 2 |
TCTTTGTAGCCTCCCTCCCT |
60.204 |
20 |
CAGGTTCGGTGCCATAATTC |
60.331 |
20 |
118 |
61 |
178 |
| 3 |
TCTTTGTAGCCTCCCTCCCT |
60.204 |
20 |
GTGTCGGATTCCGGTCATAG |
60.34 |
20 |
153 |
61 |
213 |
|
|
