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Simple sequence repeat (SSR)
>UN42259
GGAAGCTATATGATGCTGGAGCAGTGAAAGCAGTCAAGTTTGATGTGAGAGCGTCTTCGAGTCGCAAATCGTTTAAGAAACTCAGAAGAAATAC
TCAATTACAAGGTAAAGACATAACCACAAAAAATGTTACAGAAGAAGAAGTAATAACTCGAGTTGATGATGACACTTCGACTTCAAAGGCCTCC
TCTATCAATGTTGTTGCTGCTGCTGCTGCTGCTGCTGCTCCTCGAGACAAAGTGCTTCAAGCCTGCACTCTAACTTCCGGTTTAATGGCTGCAT
TAGGCCTTCTCATCAGGAAGGCGTCTCATGTTGCGTCGACTGAAGGGTTACCAATCCCAGACTGCTCTTGGATATACCATTTGGTTTCGAAACA
TGGCATCTAGGGTTAATCGCTGGAACGGTTGTGTTGATATCGTCAAGCAGGTTCTTGCTACTAAAGTCTTGGCCAGATTTTGCTGATTCAAGCC
AAGCAGCAAACCAACAGATCCTTACTTCGCTGGAACCGCTAGACTACCTTGTTGTCGCTACTTTACCTGGTATTAGTGAGGAGATGCTGTTTAG
AGGTGCGTTGATGCCTTTGTTTGGAACCAGTTGGGGAAGTATTGTGGGAGTTGGACTCATCTTCGGTTTACTTCATCTTGGAAGCGGAAGAAAG
TACTCCTTTGCTCTTTGGGCGTCGGTAGTGGGTATAGTC |
Primers for UN42259 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TTGATGTGAGAGCGTCTTCG |
60.136 |
20 |
GGCCTAATGCAGCCATTAAA |
60.061 |
20 |
249 |
40 |
288 |
2 |
TGATGCTGGAGCAGTGAAAG |
60.136 |
20 |
GGCCTAATGCAGCCATTAAA |
60.061 |
20 |
278 |
11 |
288 |
3 |
TTGATGTGAGAGCGTCTTCG |
60.136 |
20 |
ACATGAGACGCCTTCCTGAT |
59.685 |
20 |
274 |
40 |
313 |
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