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Simple sequence repeat (SSR)
>UN42300
GAGAGAAACTCCAAATTACATTTATAAAATATGAAAACTTACATTATGTTCGTCCCCCGAGGATGGGGTGTATAAACTAAAAGAAGCTGACGAT
AAGAGAGTTTCGCCAGGGCGAGAACAAGACACACACAGTAACAGAGAGTTTCAGAGACTCTTACAAACACATTACAAGCGATAAAAATATTACA
TTGTAGAGTGAATGTAAGAAGAACACAAGAGATAAAAATAAAGAGAAGATGAAATCTATTCCCCCCAAGACTTGGAACCAAATGGATACATCTT
GCTGCTTCTGCTGCTGCATAGCATCCATCGTTCCCGGCATTGACATATCATCACTGTAATCGAATGAGGCCATATCGAACGGTGGAGAATCAAA
CACAAGCTGAAACCTGTTGCTGCTACTGTTGTTATGCGCAGCTTCGAAGCTGCTGTTGGTGTGTGCAGTGTCGTACTTGAACCCATTGTTGTTG
TTCCCTTGGAAAAACGTTTGGTGGTTGCTAGTGTTGTTGTTGTTCCCTTGGAAGAACGCTTGGTTGCTACCGTTGTTGTTGTTGTTGTTAACTC
TGTTTGGTATGTTCAAGTCTTCAAAGAAGCTTCCTTCCACCATGTTTCCTTGGAACTGAAGATGTTCTTGATGATTCTGAACCGCTGGTTGAAG
CAGCGACACGCCATGATTCTCCATGACAGTTTGGTTTTGGTTGCTCTGGACGTTTCTGTCGTACATGGACATGAGCTCGGAGATCGTCTTCTGT
CCATCTTCAGGAACTCCAATACCTGTTAAGTCAATTGGCTGGGAAACCGAGTTCACTGC |
Primers for UN42300 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
| 1 |
TTGGTGTGTGCAGTGTCGTA |
59.778 |
20 |
ACCAGCGGTTCAGAATCATC |
60.081 |
20 |
222 |
432 |
653 |
| 2 |
GGAAAAACGTTTGGTGGTTG |
60.241 |
20 |
ACCAGCGGTTCAGAATCATC |
60.081 |
20 |
176 |
478 |
653 |
| 3 |
TTGGAAAAACGTTTGGTGGT |
60.241 |
20 |
ACCAGCGGTTCAGAATCATC |
60.081 |
20 |
178 |
476 |
653 |
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