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Simple sequence repeat (SSR)
>UN42340
GGAAGAGGAAGTGTTGAAAGAGATGAGTTCGTCTACACCTCTTAGACTCCTCTCCCATACACCTTCCTTGCTTCCTCCTTATCCTTCGCCACCA
TTCAAATCATCGCTAAACCCTAATTTCATTCGCTGCTCCTCCTCTTCTACCACCACCACCACCTCGTGTTCTTCTTCCCAGTGTCAGTTTTTCC
CTGTGCGAAGTCAGCTATTCAGATCCTACTCTCCGTCTATTCCCATGTGCTTGCCTAAAGGCCAAGACAACTTAGATATTTGGAGAAATGAAGA
TGATCTTGTTACATGTGGGCTTGAATCAGATGAAGATTCCGGGGGGCTTCGGATTCCAACTCAGGCTCAGGCTATAGTTGAAGGCTCTGGTTCA
GTTGCTGTCTCAGAGCTTAAACCCGCCGCTGATGTAGATTACATACAAGAGCTATTGGCGATACAGCAACAAGGGCCTAGATCAATTGGCTTCT
TTGGTACAAGGAACATGGGTTTCATGCATCAGGAACTCATCGAGATACTTAGCTACGCCATGGTTATTACAAAAAACCATATATACACTTCAGG
TGCATCTGGAACCAATGCGGCTGTTATCAGAGGTGCATTGCGAGCAGAGAGACCAGAGCTTCTTACGGTGATTTTACCTCAAAGTTTTAAAAAC
AACCTCATGAGAGCCAAGAACTCTTGTCTAAGTACAAAACGTTGTAGAAAGCATATAATGATCATTTGCATTACTAGAAGCAGCAGCTGTGTAT
ATGGACATCATAT |
Primers for UN42340 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CTTCCTCCTTATCCTTCGCC |
60.166 |
20 |
AAGCACATGGGAATAGACGG |
59.955 |
20 |
170 |
71 |
240 |
| 2 |
CTTCCTCCTTATCCTTCGCC |
60.166 |
20 |
GGGAAAAACTGACACTGGGA |
59.943 |
20 |
119 |
71 |
189 |
| 3 |
GCTTCCTCCTTATCCTTCGC |
60.307 |
20 |
AAGCACATGGGAATAGACGG |
59.955 |
20 |
171 |
70 |
240 |
|
|
