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Simple sequence repeat (SSR)
>UN42383
GGGCCGCCGCTTCTTCTTTTCAGGTAAGTAGCAGATAACCGAAAAGATGGGACGTGTCCGAACCAAGACCGTGAAGAAATCATCTCGTCAAGTC
ATCGAGAAGTACTACTCTCGCATGACGCTCGACTTCCACACCAACAAGAAGATCCTCGAAGAAGTCGCAATCATCCCTTCGAAGCGTCTCCGCA
ACAAGATCGCTGGATTCTCCACCCATTTGATGAAACGTATCCAGAAGGGACCGGTCCGTGGCATCTCGCTCAAACTCCAAGAGGAAGAGCGTGA
GCGCCGCATGGACTTTGTGCCCGATGAGTCTGCCATCAAGACCGATGTGATCAAGGTCGACAAGGAGACGCTAGAGATGCTTGCTTCCCTTGGT
ATGTCTGACGCTCATGGCTTCTCTGAAGTCGAGGCACAGGCTGCACCTTCTTTCAGCAGGCCACCAAGAAGGTTCTGAGGAGGAGGTTGTTGTT
GTTGTTGTTATCAGTCGAATCAAGAGAGAAATCTTTAGATTGGCTGTTTTTGTTTTGATGTTAGGGACGAAAGACTTACTGTTTTGAAATGTTT
ATTGTTTCTTCTGATTGGAGATTTATGTCCTAAACTGAAAGTTATACACTTTTTCTATGGTTTTATGTC |
Primers for UN42383 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AGGTCGACAAGGAGACGCTA |
60.012 |
20 |
CATCAAAACAAAAACAGCCAA |
58.711 |
21 |
195 |
336 |
530 |
| 2 |
CGATGAGTCTGCCATCAAGA |
59.942 |
20 |
CATCAAAACAAAAACAGCCAA |
58.711 |
21 |
227 |
304 |
530 |
| 3 |
CTCGCTCAAACTCCAAGAGG |
60.126 |
20 |
CATCAAAACAAAAACAGCCAA |
58.711 |
21 |
278 |
253 |
530 |
|
|
