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Simple sequence repeat (SSR)
>UN42390
GGACCACCTTCACTTACATTCGCGCTTCCCAAAAGTTTCAGAGGGTTTTGGTCTCTCGACGAAGAAGAAGAAACGATGAATATGGACGGGTCTC
TTGATTTCGAGAACGAAGATCCTCTTGTTAACCCTCCACCATCTGCTGAGAAAAGGAAGAAAGTGATTGAGTTAGATGATCTTGTCTCCGATTT
TTGCAAAGAGAAGAGCAAACTCATAGACAAACGAAACAGGAAACGCAAAGCCTCCTCTAAGCTTTACGATTCTGATGATGATGATGATGATAAA
CATGGCCAACAAGCTTTGCTTTCCATTGTTAATAACTGTCGTAATCAGATGAATGAGATATGCAGCGAAGAAGATATCCAAGAGTGGGGTTTAT
CTATGTTTGGAGATCAGAAAGCTCCAACTCATTCACTGCTTGCTGATCTCGACAACTGCTACTTGTTGAAAGAGTTTATGAGTAGTCAGCTAAA
CTCGGTGGTGGATCTTAATCCAGATAACGGAACGGCATTTCTTGAGGGGTTACTGGTTAACGGCTGGCTCACAAAACTGATCTTGACGTGTGCA
CGTGTGGAAACGATCATATGCAAATGGACGCTTGATATGTTGTTGTATTCACCAAAAGAAGACCTAAGGTCTTCTGCTTGTGACTTCTGGTGTT
CCATACTCTTATCACATAACGAGGTGATGGAGCTCCTGTTGAGATCCAATGGCTTCCTAACTATCAGATATTTAAAGAAGCTCTTGAATCATAT
GGGTTCAGATTCATTCATCACAAAATACTGAGC |
Primers for UN42390 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACAAACGAAACAGGAAACGC |
60.154 |
20 |
GTTGTCGAGATCAGCAAGCA |
60.144 |
20 |
218 |
215 |
432 |
2 |
ACAAACGAAACAGGAAACGC |
60.154 |
20 |
GGATTAAGATCCACCACCGA |
59.75 |
20 |
277 |
215 |
491 |
3 |
ACAAACGAAACAGGAAACGC |
60.154 |
20 |
TGTCGAGATCAGCAAGCAGT |
59.733 |
20 |
216 |
215 |
430 |
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