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Simple sequence repeat (SSR)
>UN42394
GGAATCTTCCCGCGTCTTTCACACACTTCAGTCTCGCCGCCGGCGGAAACTTTCGCTTCCTCCCTTCCCTCCGTCAATCTAGATCTCATATCCG
TAGTATCGAAACTTTTCAAATTCGTCCTCTTGTTCTTCTTCTTCTTCATCTTCTTCTTCTTCTTAAGACATTGAAGTCGGAAGAAGCTCGAATT
GGTGAACTTTTGAGCTCTGAAGGAAGTGAATTATGAGCAGCAGCTCCAGAGAGGGATCTCCCGATTGGCTTCGATCTTTCCAGGCACCCACCAC
CACTTCATTGTTATCGCTATCATCTTCAGATGATAGTCCTTGCAGGGAATCTGAAACCATTTCGTCTCTTCCTGTGACTGGTGACGGTGATGCC
GTCGTTACTATTGTGGACAAAGAGTCCTCGGAGTCTCTGTCTAAGAAGGATTCGAAAACGAAGTTGGTGACGAAGCAAGTGAGTATCGAGCAGG
TGTTCTCTAGGAGGAAGAAGAAAGTAGATGCTAGTCTTGACCTTGAAGAGAAGGAGAATGGAAATAAAGTTGATGGTGAAGAGAACTCTAGCAA
GCAGAAGGACGCTAAAGAAGGAGATGATTATGTATGGTTTGTCTCATCTGATTCTGAACCACCCTCTACTGAACCAATGAGTCAGCAAGTGACT
ATGGCAACTGAAAAAGATGAGGATATTATTATTCAAGCCAAAGAGAAAGAACCTGCGGTTAAGAAGGCTCC |
Primers for UN42394 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCACACACTTCAGTCTCGCC |
60.03 |
20 |
CAATTCGAGCTTCTTCCGAC |
59.955 |
20 |
171 |
19 |
189 |
2 |
TCACACACTTCAGTCTCGCC |
60.03 |
20 |
ACAATGAAGTGGTGGTGGGT |
60.135 |
20 |
275 |
19 |
293 |
3 |
TCACACACTTCAGTCTCGCC |
60.03 |
20 |
TGGAAAGATCGAAGCCAATC |
60.155 |
20 |
252 |
19 |
270 |
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