Simple sequence repeat (SSR)
>UN42398
GGAGATACTCTCTCTCCCTCTCTCTCTCTCTCTCGCTACTACTAGTCAATACCCAGACAAAACTAAAACTAAAACTAAACTGAGATCTACCCAA
AAAAAAAGAAATAAGAAGAATGTTGGAGCTGTTTTTCACGATAGCGTTCTCGGCGGCGCCGTTAACGTTGTACATACCGCCGATAAGATGTTTG
ACGATGTTCGTGGAGACGATGGAGGAGATGGGGACGGAAGGTAGGGTTTATAGCAGTAGAGTCTTCCCTCGCGCCAGAATTGCTTGGTCTCGCC
TTCTCGATTGCTTCTTCTCCTCTTCTCCTCCTCCTCCTCCTCCTTCTCGCCGTCCTTAAAATTAAATTACTCAGTTCGTCTTCTCCTACTTACC
CTTCCCTCTTGTAGATAGATATATCTCATGTCTACTTGCTGTGTGTGTTTTGATCACGATTTGGGATGATTCAAGATGATGATAGAGAGACTTG
TTCTTGATTTTTTTAATAATTACAGACATGATATGATGAATC |
Primers for UN42398 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGGACGGAAGGTAGGGTTTA |
60.18 |
20 |
TGAATCATCCCAAATCGTGA |
59.859 |
20 |
231 |
219 |
449 |
| 2 |
CCGCCGATAAGATGTTTGAC |
60.469 |
20 |
TGAATCATCCCAAATCGTGA |
59.859 |
20 |
279 |
171 |
449 |
| 3 |
ACCGCCGATAAGATGTTTGA |
60.469 |
20 |
TGAATCATCCCAAATCGTGA |
59.859 |
20 |
280 |
170 |
449 |
|
|
