 |
Simple sequence repeat (SSR)
>UN03841
CGAAACGTCATTGCTTCTTTGTTGATACATTTTTTACCGTTTTTGCCTCAAATTGGGGCCCCCAATCATGACACTCGGATGACTGTTTCCAATT
GAAAATTTGCGGCTTACAAGAAACACGAAGGGTTTATATAATAATATCTAAGAATCCAAACAAAATAAAAAACTTCAGAAAAGTCATAAACTTA
AACAAGCATCAAGAACTCCAACCATATATCAAGTAGTCCATCCGTCACCAAGACCGTAAGCATCTCTATAACCGGCGTGGACATGGTCATGGTC
CCCACCGGCGTTTGCTTCATCCAATATTTTCTGAACTTTCTCTGGGATAGGTTCTTCAGAGACCCGTCTGATGGATCTCGGGAATGCAGAGACG
AAATCAGCAATGTAATCTGTAAGCTCGCCCGATTTGCTTTCCTGAGGCCACCGGCTGCCTGAATGAGTAACAAACTTTGCCTTTGGAAGAGCCT
TAGCTACACGTTGGCCTTCCTGGATCCATACATCAGAAACTTGTTTAGACCAAATCACTTGCATCGGGATACCATTGACAGCATCTGAGTTACC
CCACTGTGCAATGTCAAAGCTATGGTTTAGCTTCTTAAGCGAGGCAAGAAGAGCTTCCCTCCCGTTTTTGCCTTTCAAAAGTATCCTATGAGCT
TCGACTTGCGATAAAGTCATCTCCTTTGAGCAACGTAAGCTCACTAGCTTCTTGAAACCAAACGAAAACCCTAACAAGACCTCTCTTATTACAG
GTATGTGCAAAACCCACAAGGGCAGTGCTGGGTTAACACTGGGGTCGACAAGCGTTATACTCCGAACACTTTGGGGATTCTCGGAAACCCAGTT
TGCAGCTAACCCGAGAGCTGAATCATGAAGAACCAAATGCACAGGAGATAGACCCAAAGTATCAATCACTTGACCTAAAACCTTAGCTGTTTCT
TCACTCCCAAGTTCAATAGCTTTCAAGCTTCTCCGTTTGGAGTTTTGAATCTTCATGATTTCCTCGTAAGGCAAATCTCCAGTCTCAACCATCT
GATCAAACGCCCAGAAAACGCCTTTCTCTTGAATCAAACCATAAACTTCCTTAACTCTACCCAAAAACCCTATCTCTCTATCTCCACCTACCAC
TACCATCGATTTGTCGGAGAACCCATTTCCGGGTAAATCGATAGCTACACCGTGAATCCCTTTAGATCCGAGAGATTGGATCATCTCTCGAAAC
GCGTACGAGCTAAGCCCTAACCCATGAACGATCATCACATTCTCCGACTGAACCGGACCAGATTCAGCTGCAAAGACTTCGAGTGGTGATTCGT
CTGGGTTTAACTGGACTTTGATGGTTCTTCCATCTGAGTAATGTTGACGTAGAGCAGGTGGGAGGGAGAGAAACCAGGATCTGGGGTCGTTCTG
AGAGAGAGATAGGAGGAGGAGAGTGGCGAGTGAGGAGATGATTGTAAAGTAGAACCAAAAAGGAAAAGGGTTTTGAGATTGACGTTTAGGGTTC
TTCATACTCGATTCTTTACTCCCAGGAGGATCTATGGTTTTCGTTACATCTTCTTCTTCTGTGATAATCGCCATAAAAGAGAGCTTTGGAAGAT
GAGAGAGAGAGAGAAAGTGTGGGAGAAAGTGAGAAGTGGAGCTGTCTTTCAGACGACTTTCTCAGTAAACGTGAAAAGAGGAAAGTGTCC |
Primers for UN03841 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GTGGCGAGTGAGGAGATGAT |
60.231 |
20 |
TCGTCTGAAAGACAGCTCCA |
59.701 |
20 |
222 |
1433 |
1654 |
| 2 |
AGAGAAACCAGGATCTGGGG |
60.447 |
20 |
TCGTCTGAAAGACAGCTCCA |
59.701 |
20 |
272 |
1383 |
1654 |
| 3 |
GGAGGGAGAGAAACCAGGAT |
59.492 |
20 |
TCGTCTGAAAGACAGCTCCA |
59.701 |
20 |
278 |
1377 |
1654 |
|
|
