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Simple sequence repeat (SSR)
>UN42461
GGACTTGTCTTTCTACCTTTTCTTGTTCTTCACAACAAAAACAAAAATCTTCTCTTTTTCTCTAAACACAAATTTATTCAAAGAATCTCAAAGA
TTCAACGAGATGTACAACAAATGCAGCTCTCCTTCTTCCGCAAGATCGATAAGAAGTCACAGAATGAGATCTCCGATCTGCTGTTTAGGAGCCA
ACGCTGTGGTCGAGCCTGAAGCCATGATCGGATCATCAAAGACTCCCAAATCTCCTTACGAGTGGCTCAAATCAACAGCGCAGGAGCTCGAGAT
CAGAGATCGCTGCCGCCGCGTCAAGACCCGCATCAAGGTCACGTGCCGCAACAACAACTGCGTTCATCCACATCACCATCATCATCATCATCAT
CACCAGAGCGGCCCGAGCTATCCTGTGGATTTCAGCTACGATCCTTTGAGCTACGCGCTCAATTTCGAGGACGACGTGCGGGCGTACGAGGATG
TTTCTTTCCCGAATTTCACGGCGAGGTTGCCTGCGTCTCCGGTGGCGAAAAGATCGGCGACGGTTGATCTTATCTCGTTCTAACTGTTGATCAG
TCCCCTTTGCTTTTATCATGTGACGCGCGGCGGAATATATAAATGTTCCTCTGTTGTGTGCTTGGCGTACATATACGACGTCGTTAATATAATT
GTAAATGCTCTTTCGCATATAGATTGATGTGTGCAAAAAATAATAAAGAAACATTTTCTATATC |
Primers for UN42461 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCGGATCATCAAAGACTCCC |
60.011 |
20 |
CGTGAAATTCGGGAAAGAAA |
60.046 |
20 |
275 |
216 |
490 |
| 2 |
CAACTGCGTTCATCCACATC |
60.12 |
20 |
CGTGAAATTCGGGAAAGAAA |
60.046 |
20 |
154 |
337 |
490 |
| 3 |
AACAACTGCGTTCATCCACA |
60.16 |
20 |
CGTGAAATTCGGGAAAGAAA |
60.046 |
20 |
156 |
335 |
490 |
|
|
