Simple sequence repeat (SSR)
>UN42511
GGGATTCTGTGTTGCGGCAAATTTTGTAGAGTGAAGAGAAGAGGGATATGGCATGGAGAGGAAACATATCGAGTCTCTCAAAGAGCTCAGGATC
CTTTTCTGTCAATCTTCTCCTGCCAGCGCTTCCACCAGGACGTTCGTGGAGAAGAATTACAAAGAATTGAAGTCTCTAAACCCAAAGTTTCCCT
TCCTGATCCGAGAATGTAGTGGAATCCAGCCTCAAATGTGGGCTAGATATGATATGGGTGTGGAGAGGTGTGTAAACTTGGATGGGATGAGCGA
GACACAGATTCTCAAGTCTCTTCAAGATCTTGTCAAAGCTGGAGGAGCTACAAAAGCCTAAGGTTATTTGTTTTCTTTTTTACCTATCTAGATG
ATCTCGAATAAGCTAATAACTGGAAACACTCAATTTGACAATTTCCTGTCATTATATTACTTTGCAACTCTCTGGTGTCATATCGCCTCTTTGT
TTTGAGTTGTTTCTTATTTGTGTGTGTGTGTGTAATCCTCGAACTTGGTGGTATTAATGGAACCGTTCCGTATG |
Primers for UN42511 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CTTGTCAAAGCTGGAGGAGC |
60.134 |
20 |
CGGTTCCATTAATACCACCAA |
59.573 |
21 |
225 |
311 |
535 |
| 2 |
GGGATGAGCGAGACACAGAT |
60.231 |
20 |
CGGTTCCATTAATACCACCAA |
59.573 |
21 |
264 |
272 |
535 |
| 3 |
CTGGAGGAGCTACAAAAGCC |
59.077 |
20 |
CGGTTCCATTAATACCACCAA |
59.573 |
21 |
215 |
321 |
535 |
|
|
