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Simple sequence repeat (SSR)
>UN42521
GGGCGCCGTAGTCGTAGTCTATCTTATTCTTACCGTTTCTCGATTGATTTCTGATCATGGCGATGAACACAGGAATCAGATCTATCTCAAAGAT
AATAGCTTCATCCGAATTATCAGTCTCCAGATCTGTGAGCAGAAGCTTCCACTCAACTGGAGCTAAGAGGATGAGCGGAGGAGGGCATGGTCAT
GACGAGCCATACTACCTACACGCAAAGCACATGTACAATTTGGACCGCATGAAGTACCAAGGTCTCAAGATGTCTCTCGGTGTCTTTACTGCTT
TCAGCATTGGCGTTGGAGTTCCTATCTTTGCTGTTGTCTTCCAGCAGAGGAAGACTGCCTCTGGTTGACTTCACTCTCTCTCTCTCTCTCTCTC
TTCTTCTCTGCTTCAATAATTTTGTTTTTAATTCTCAAACTCTGCCTCTTGCTGCAAGAGAGACCTTTCTTGCTTCTTTTTGGGATCTTAGCCA
CAAGTCTGATCGTTATGGTAAAAGTACATTATTCATCCTCCTTTTTACTGGCTGTTTGACGCTGGAATAATCTAACTTTGATTGGAATCGCAAG
TCAATTGTTTGAACATTTTTTCAGTTTGAGCAAACAATTTGTTTTATTCAACATGTAG |
Primers for UN42521 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TTGGCGTTGGAGTTCCTATC |
60.074 |
20 |
CAGCGTCAAACAGCCAGTAA |
60.05 |
20 |
246 |
289 |
534 |
2 |
TTGCTGTTGTCTTCCAGCAG |
60.175 |
20 |
CAGCGTCAAACAGCCAGTAA |
60.05 |
20 |
225 |
310 |
534 |
3 |
TGGCGTTGGAGTTCCTATCT |
59.694 |
20 |
CAGCGTCAAACAGCCAGTAA |
60.05 |
20 |
245 |
290 |
534 |
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