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Simple sequence repeat (SSR)
>UN42548
GGGGCAGATTGGAAGATTGTCTGCAATTATTGGTGGAGAGCAACCGGATACCAGAAGCTGCTCTGATGGCACGTTCTTATCTTCCAAGCAAAGT
TTCAGAGATAGTTGCTCTTTGGAGGAAAGATCTCAGCAAGGTTAATTCGAAAGCAGCAGAATCTTTGGCTGATCCTGAAGAGTACCCAAATCTT
TTTGAGGATTGGCAAATTGCTCTTTCTGTTGAAGCGAAAGCTGTAGAGACGAGGGGAGTTTATGCTGCTGCAGAAAATTATCCAACCCACGCTG
ATCAACCTGCCATTACCCTCGTGGAAGCCTTCAGAAACCCGCAAGTTGAAGCAGAGGAAACACTTGAAAATGGACACATGGAACAAGAGTCTGA
GCAGGTAGCAGAAGAAAATGGTCATGAAGAGAATGAAGAGGAGCAGCAACATGAAGAAGAAGAAGAAGAAGTGAATCAAGAAGAGGGAGTTGTT
GTTGATGGAGACTCAACGGATGGTGGCGCTGTACTTGTTAATGGAAGTGAGGGTGAGGAAGAGTGGGGTACGAATAACAAAGGAAACCAACCAG
CCTAATAAAGCAAAGCTTACGCCACGTCAATAGCCAGTTACAGTACTTGGGATGCGTTCCGGAGCAGGAAGTGGTGGTCTTTTTTTCTTCAAAG
TGGTATTGTGGTTTTCTCGTATAATTAATCATTATAAAGTACATTAGAGAGTTTCTTTCGAACAAGTTACTGCTTTAGATTTCACAGCTCATGT
TTACAGATTGCTAGTGCATATATAATTCTTTCGGAGACCCTTACTTTTGC |
Primers for UN42548 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AAATTATCCAACCCACGCTG |
59.823 |
20 |
CTTCCTCACCCTCACTTCCA |
60.229 |
20 |
269 |
263 |
531 |
2 |
GAGGGGAGTTTATGCTGCTG |
59.836 |
20 |
TAACAAGTACAGCGCCACCA |
60.316 |
20 |
272 |
239 |
510 |
3 |
AAATTATCCAACCCACGCTG |
59.823 |
20 |
TAACAAGTACAGCGCCACCA |
60.316 |
20 |
248 |
263 |
510 |
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